Research ExplorerResearch UnitsInstitute of Computational Neuroscience Publications

Institute of Computational Neuroscience

51 - 100 out of 498Page size: 50

Publications

  1. 2021

  2. Spatio-temporal feature learning with reservoir computing for T-cell segmentation in live-cell Ca2+ fluorescence microscopy

    Hadaeghi, F., Diercks, B-P., Schetelig, D., Damicelli, F., Wolf, I. M. A. & Werner, R., 15.04.2021, In: SCI REP-UK. 11, 1, 8233.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  3. A Connectomic Hypothesis for the Hominization of the Brain

    Changeux, J-P., Goulas, A. & Hilgetag, C. C., 31.03.2021, In: CEREB CORTEX. 31, 5, p. 2425-2449 25 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  4. HN1L/JPT2: A signaling protein that connects NAADP generation to Ca2+ microdomain formation

    Roggenkamp, H. G., Khansahib, I., Hernandez C, L. C., Zhang, Y., Lodygin, D., Krüger, A., Gu, F., Möckl, F., Löhndorf, A., Wolters, V., Woike, D., Rosche, A., Bauche, A., Schetelig, D., Werner, R., Schlüter, H., Failla, A. V., Meier, C., Fliegert, R., Walseth, T. F., Flügel, A., Diercks, B-P. & Guse, A. H., 23.03.2021, In: SCI SIGNAL. 14, 675

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  5. Imaging evolution of the primate brain: the next frontier?

    Friedrich, P., Forkel, S. J., Amiez, C., Balsters, J. H., Coulon, O., Fan, L., Goulas, A., Hadj-Bouziane, F., Hecht, E. E., Heuer, K., Jiang, T., Latzman, R. D., Liu, X., Loh, K. K., Patil, K. R., Lopez-Persem, A., Procyk, E., Sallet, J., Toro, R., Vickery, S., Weis, S., Wilson, C. R. E., Xu, T., Zerbi, V., Eickoff, S. B., Margulies, D. S., Mars, R. B. & Thiebaut de Schotten, M., 03.2021, In: NEUROIMAGE. 228, p. 117685

    Research output: SCORING: Contribution to journal › SCORING: Review article › Research

  6. The natural axis of transmitter receptor distribution in the human cerebral cortex

    Goulas, A., Changeux, J-P., Wagstyl, K., Amunts, K., Palomero-Gallagher, N. & Hilgetag, C. C., 19.01.2021, In: P NATL ACAD SCI USA. 118, 3, e2020574118.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  7. Comparison of intelligent 4D CT sequence scanning and conventional spiral 4D CT: a first comprehensive phantom study

    Werner, R., Szkitsak, J., Sentker, T., Madesta, F., Schwarz, A., Fernolendt, S., Vornehm, M., Gauer, T., Bert, C. & Hofmann, C., 08.01.2021, In: PHYS MED BIOL. 66, 1, 10 p., 015004.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  8. PAIP 2019: Liver cancer segmentation challenge

    Kim, Y. J., Jang, H., Lee, K., Park, S., Min, S-G., Hong, C., Park, J. H., Lee, K., Kim, J., Hong, W., Jung, H., Liu, Y., Rajkumar, H., Khened, M., Krishnamurthi, G., Yang, S., Wang, X., Han, C. H., Kwak, J. T., Ma, J., Tang, Z., Marami, B., Zeineh, J., Zhao, Z., Heng, P-A., Schmitz, R., Madesta, F., Rösch, T., Werner, R., Tian, J., Puybareau, E., Bovio, M., Zhang, X., Zhu, Y., Chun, S. Y., Jeong, W-K., Park, P. & Choi, J., 01.2021, In: MED IMAGE ANAL. 67, p. 101854 16 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  9. Reduktion der Kalibrierungszeit für die Magnetpartikelbildgebung mittels Deep Learning

    Baltruschat, I. M., Szwargulski, P., Griese, F., Grosser, M., Werner, R. & Knopp, T., 2021, Bildverarbeitung für die Medizin 2021 - Proceedings, German Workshop on Medical Image Computing, 2021. Palm, C., Handels, H., Maier-Hein, K., Deserno, T. M., Maier, A. & Tolxdorff, T. (eds.). Springer Science and Business Media Deutschland GmbH, p. 337 1 p. (Informatik aktuell).

    Research output: SCORING: Contribution to book/anthology › Conference contribution - Article for conference › Research › peer-review

  10. Single Image-Based Vignetting Correction for Improving the Consistency of Neural Activity Analysis in 2-Photon Functional Microscopy

    Li, D., Wang, G., Werner, R., Xie, H., Guan, J-S. & Hilgetag, C-C., 2021, In: FRONT NEUROINFORM. 15, p. 674439 674439.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  11. 2020

  12. Cross-species functional alignment reveals evolutionary hierarchy within the connectome

    Xu, T., Nenning, K-H., Schwartz, E., Hong, S-J., Vogelstein, J. T., Goulas, A., Fair, D. A., Schroeder, C. E., Margulies, D. S., Smallwood, J., Milham, M. P. & Langs, G., 12.2020, In: NEUROIMAGE. 223, p. 117346

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  13. Structural integrity of white matter tracts as a predictor of acute ischemic stroke outcome

    Rajashekar, D., Mouchès, P., Fiehler, J., Menon, B. K., Goyal, M., Demchuk, A. M., Hill, M. D., Dukelow, S. P. & Forkert, N. D., 12.2020, In: INT J STROKE. 15, 9, p. 965-972 8 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  14. Digital Health meets Hamburg integrated medical degree program iMED: Concept and introduction of the new interdisciplinary 2nd track Digital Health

    Werner, R., Henningsen, M., Schmitz, R., Guse, A. H., Augustin, M. & Gauer, T., 16.11.2020, In: GMS Journal for Medical Education. 37, 6, p. Doc61 10 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Education › peer-review

  15. Self-contained deep learning-based boosting of 4D cone-beam CT reconstruction

    Madesta, F., Sentker, T., Gauer, T. & Werner, R., 11.2020, In: MED PHYS. 47, 11, p. 5619-5631 13 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  16. Künstliche Intelligenz in der Medizin

    Werner, R. & Schmitz, R., 21.10.2020, Digitale Medizin. Matusiewicz, D., Henningsen, M. & Ehlers, J. P. (eds.). 1 ed. Medizinisch Wissenschaftliche Verlagsgesellschaft, p. 125-138 14 p.

    Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review

  17. 3d-SMRnet: Achieving a New Quality of MPI System Matrix Recovery by Deep Learning

    Baltruschat, I. M., Szwargulski, P. K., Griese, F., Grosser, M., Werner, R. & Knopp, T., 10.2020, Medical Image Computing and Computer Assisted Intervention – MICCAI 2020: 23rd International Conference, Lima, Peru, October 4–8, 2020, Proceedings, Part II. 1 ed. Springer Nature Switzerland, p. 74-82 9 p. (Lecture Notes in Computer Science (LNCS); no. 12262).

    Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review

  18. Systematic modelling of the development of laminar projection origins in the cerebral cortex: Interactions of spatio-temporal patterns of neurogenesis and cellular heterogeneity

    Beul, S. F. & Hilgetag, C. C., 10.2020, In: PLOS COMPUT BIOL. 16, 10, p. e1007991

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  19. Time Matters: Handling Spatio-Temporal Perfusion Information for Automated TICI Scoring

    Nielsen, M., Waldmann, M., Sentker, T., Frölich, A., Fiehler, J. & Werner, R., 10.2020, MICCAI 2020. 1 ed. Springer Nature Switzerland, Vol. 12266. p. 86-96 11 p. (Lecture Notes in Computer Science (LNCS)).

    Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review

  20. Widening the Focus: Biomedical Image Segmentation Challenges and the Underestimated Role of Patch Sampling and Inference Strategies

    Madesta, F., Schmitz, R., Rösch, T. & Werner, R., 10.2020, MICCAI 2020. 1 ed. Springer Nature Switzerland, Vol. 12264. p. 289-298 10 p. (Lecture Notes in Computer Science (LNCS)).

    Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review

  21. Automatic arterial input function selection in CT and MR perfusion datasets using deep convolutional neural networks

    Winder, A., d’Esterre, C. D., Menon, B. K., Fiehler, J. & Forkert, N. D., 01.09.2020, In: MED PHYS. 47, 9, p. 4199-4211 13 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  22. Shaping brain structure: Genetic and phylogenetic axes of macroscale organization of cortical thickness

    Valk, S. L., Xu, T., Margulies, D. S., Masouleh, S. K., Paquola, C., Goulas, A., Kochunov, P., Smallwood, J., Yeo, B. T. T., Bernhardt, B. C. & Eickhoff, S. B., 09.2020, In: SCI ADV. 6, 39

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  23. Game theoretical mapping of white matter contributions to visuospatial attention in stroke patients with hemineglect

    Toba, M. N., Zavaglia, M., Malherbe, C., Moreau, T., Rastelli, F., Kaglik, A., Valabrègue, R., Pradat-Diehl, P., Hilgetag, C. C. & Valero-Cabré, A., 01.08.2020, In: HUM BRAIN MAPP. 41, 11, p. 2926-2950 25 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  24. 4D CT image artifacts affect local control in SBRT of lung and liver metastases

    Sentker, T., Schmidt, V., Ozga, A-K., Petersen, C., Madesta, F., Hofmann, C., Werner, R. & Gauer, T., 07.2020, In: RADIOTHER ONCOL. 148, p. 229-234 6 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  25. Segmentation-Based Blood Flow Parameter Refinement in Cerebrovascular Structures Using 4-D Arterial Spin Labeling MRA

    Phellan, R., Lindner, T., Helle, M., Falcao, A. X., Yasuda, C. L., Sokolska, M., Jager, R. H. & Forkert, N. D., 07.2020, In: IEEE T BIO-MED ENG. 67, 7, p. 1936-1946 11 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  26. Individual differences in local functional brain connectivity affect TMS effects on behavior

    Gießing, C., Alavash, M., Herrmann, C. S., Hilgetag, C. C. & Thiel, C. M., 26.06.2020, In: SCI REP-UK. 10, 1, p. 10422

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  27. Intelligent 4D CT sequence scanning (i4DCT): First scanner prototype implementation and phantom measurements of automated breathing signal-guided 4D CT

    Werner, R., Sentker, T., Madesta, F., Schwarz, A., Vornehm, M., Gauer, T. & Hofmann, C., 06.2020, In: MED PHYS. 47, 6, p. 2408-2412 5 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  28. Reply: Inhibition between human brain areas or methodological artefact?

    Toba, M. N., Malherbe, C., Godefroy, O., Rushmore, R. J., Zavaglia, M., Maatoug, R., Mandonnet, E., Valero-Cabré, A. & Hilgetag, C. C., 05.2020, In: BRAIN. 143, 5, p. e39 e39.

    Research output: SCORING: Contribution to journal › Other (editorial matter etc.) › Research

  29. Technological quality requirements for stereotactic radiotherapy: Expert review group consensus from the DGMP Working Group for Physics and Technology in Stereotactic Radiotherapy

    Schmitt, D., Blanck, O., Gauer, T., Fix, M. K., Brunner, T. B., Fleckenstein, J., Loutfi-Krauss, B., Manser, P., Werner, R., Wilhelm, M-L., Baus, W. W. & Moustakis, C., 05.2020, In: STRAHLENTHER ONKOL. 196, 5, p. 421-443 23 p.

    Research output: SCORING: Contribution to journal › SCORING: Review article › Research

  30. 'Hierarchy' in the organization of brain networks

    Hilgetag, C. C. & Goulas, A., 13.04.2020, In: PHILOS T R SOC B. 375, 1796, p. 20190319

    Research output: SCORING: Contribution to journal › SCORING: Review article › Research

  31. Unifying the essential concepts of biological networks: biological insights and philosophical foundations

    Kostić, D., Hilgetag, C. C. & Tittgemeyer, M., 13.04.2020, In: PHILOS T R SOC B. 375, 1796, p. 20190314

    Research output: SCORING: Contribution to journal › Other (editorial matter etc.) › Research

  32. Parcellation influence on the connectivity-based structure-function relationship in the human brain

    Messé, A., 01.04.2020, In: HUM BRAIN MAPP. 41, 5, p. 1167-1180 14 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  33. Reservoir Computing for Jurkat T-cell Segmentation in High Resolution Live Cell Ca2+ Fluorescence Microscopy

    Hadäghi, F., Diercks, B-P., Wolf, I. & Werner, R., 01.04.2020, In: Proc IEEE ISBI 2020. 1, p. 1587-1591 5 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  34. Revisiting 'brain modes' in a new computational era: approaches for the characterization of brain-behavioural associations

    Toba, M. N., Godefroy, O., Rushmore, R. J., Zavaglia, M., Maatoug, R., Hilgetag, C. C. & Valero-Cabré, A., 01.04.2020, In: BRAIN. 143, 4, p. 1088-1098 11 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  35. Ischemic lesion growth in acute stroke: Water uptake quantification distinguishes between edema and tissue infarct

    Broocks, G., Hanning, U., Faizy, T. D., Scheibel, A., Nawabi, J., Schön, G., Forkert, N. D., Langner, S., Fiehler, J., Gellißen, S. & Kemmling, A., 04.2020, In: J CEREBR BLOOD F MET. 40, 4, p. 823-832 10 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  36. Correction: Improved multi-parametric prediction of tissue outcome in acute ischemic stroke patients using spatial features

    Grosser, M., Gellißen, S., Borchert, P., Sedlacik, J., Nawabi, J., Fiehler, J. & Forkert, N. D., 13.03.2020, In: PLOS ONE. 15, 3, p. e0230653

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  37. Combining Direct 3D Volume Rendering and Magnetic Particle Imaging to Advance Radiation-Free Real-Time 3D Guidance of Vascular Interventions

    Weller, D., Salamon, J. M., Frölich, A., Möddel, M., Knopp, T. & Werner, R., 02.2020, In: CARDIOVASC INTER RAD. 43, 2, p. 322-330 9 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  38. Skin Lesion Classification Using CNNs with Patch-Based Attention and Diagnosis-Guided Loss Weighting

    Gessert, N., Sentker, T., Madesta, F., Schmitz, R., Kniep, H., Baltruschat, I., Werner, R. & Schlaefer, A., 02.2020, In: IEEE T BIO-MED ENG. 67, 2, p. 495-503 9 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  39. Perturbation-driven paradoxical facilitation of visuo-spatial function: Revisiting the 'Sprague effect'

    Valero-Cabré, A., Toba, M. N., Hilgetag, C. C. & Rushmore, R. J., 01.2020, In: CORTEX. 122, p. 10-39 30 p.

    Research output: SCORING: Contribution to journal › SCORING: Review article › Research

  40. Improved multi-parametric prediction of tissue outcome in acute ischemic stroke patients using spatial features

    Grosser, M., Gellißen, S., Borchert, P., Sedlacik, J., Nawabi, J., Fiehler, J. & Forkert, N. D., 2020, In: PLOS ONE. 15, 1, p. e0228113

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  41. Künstliche Intelligenz in der Endoskopie: Neuronale Netze und maschinelles Sehen – Techniken und Perspektiven (reprint Z Gastroenterol 2019; 57(06): 767-780)

    Schmitz, R., Werner, R. & Rösch, T., 2020, In: Endo-Praxis. 2020, 36, p. 30-43

    Research output: SCORING: Contribution to journal › Other (editorial matter etc.) › Research

  42. Skin lesion classification using ensembles of multi-resolution EfficientNets with meta data

    Gessert, N., Nielsen, M., Shaikh, M., Werner, R. & Schlaefer, A., 2020, In: METHODSX. 7, 7, p. 100864 8 p., 100864.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  43. The Impact of Covariates in Voxel-Wise Lesion-Symptom Mapping

    Rajashekar, D., Wilms, M., Hecker, K. G., Hill, M. D., Dukelow, S., Fiehler, J. & Forkert, N. D., 2020, In: FRONT NEUROL. 11, p. 854

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  44. 2019

  45. Altered topology of large-scale structural brain networks in chronic stroke

    Cheng, B., Schlemm, E., Schulz, R., Bönstrup, M., Messe, A., Hilgetag, C-C., Gerloff, C. & Thomalla, G., 04.10.2019, In: BRAIN COMMUN. 2019, 1, p. 1-13

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  46. The architecture of mammalian cortical connectomes in light of the theory of the dual origin of the cerebral cortex

    Goulas, A., Margulies, D. S., Bezgin, G. & Hilgetag, C. C., 09.2019, In: CORTEX. 118, p. 244-261 18 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  47. Intelligent 4D CT sequence scanning (i4DCT): Concept and performance evaluation

    Werner, R., Sentker, T., Madesta, F., Gauer, T. & Hofmann, C., 13.08.2019, In: MED PHYS. 46, 8, p. 3462-3474 13 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  48. Cortical thickness and cognitive performance in asymptomatic unilateral carotid artery stenosis

    Nickel, A., Kessner, S., Niebuhr, A., Schröder, J., Malherbe, C., Fischer, F., Heinze, M., Cheng, B., Fiehler, J., Pinnschmidt, H., Larena-Avellaneda, A., Gerloff, C. & Thomalla, G., 25.06.2019, In: BMC CARDIOVASC DISOR. 19, 1, p. 154

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  49. Cortical and thalamic connectivity of occipital visual cortical areas 17, 18, 19 and 21 of the domestic ferret (Mustela putorius furo)

    Dell, L-A., Innocenti, G. M., Hilgetag, C. C. & Manger, P. R., 01.06.2019, In: J COMP NEUROL. 527, 8, p. 1293-1314 22 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  50. Cortical and thalamic connectivity of posterior parietal visual cortical areas PPc and PPr of the domestic ferret (Mustela putorius furo)

    Dell, L-A., Innocenti, G. M., Hilgetag, C. C. & Manger, P. R., 01.06.2019, In: J COMP NEUROL. 527, 8, p. 1315-1332 18 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  51. Cortical and thalamic connectivity of temporal visual cortical areas 20a and 20b of the domestic ferret (Mustela putorius furo)

    Dell, L-A., Innocenti, G. M., Hilgetag, C. C. & Manger, P. R., 01.06.2019, In: J COMP NEUROL. 527, 8, p. 1333-1347 15 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  52. Künstliche Intelligenz in der Endoskopie: Neuronale Netze und maschinelles Sehen – Techniken und Perspektiven

    Schmitz, R., Werner, R. & Rösch, T., 06.2019, In: Z GASTROENTEROL. 57, 6, p. 767-780 14 p.

    Research output: SCORING: Contribution to journal › SCORING: Review article › Research

  53. Spatiotemporal ontogeny of brain wiring

    Goulas, A., Betzel, R. F. & Hilgetag, C. C., 06.2019, In: SCI ADV. 5, 6, p. eaav9694

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

Previous 1 2 3 4 5 6 7 8 ...10 Next