Research ExplorerResearch UnitsInstitute of Medical Systems Biology Publications

Institute of Medical Systems Biology

1 - 50 out of 69Page size: 50

Publications

  1. 2024

  2. Fetal lung growth predicts the risk for early-life respiratory infections and childhood asthma

    Zazara, D. E., Giannou, O., Schepanski, S., Pagenkemper, M., Giannou, A. D., Pincus, M., Belios, I., Bonn, S., Muntau, A. C., Hecher, K., Diemert, A. & Arck, P. C., 05.2024, In: WORLD J PEDIATR. 20, 5, p. 481-495 15 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  3. DISSECT: deep semi-supervised consistency regularization for accurate cell type fraction and gene expression estimation

    Khatri, R., Machart, P. & Bonn, S., 30.04.2024, In: GENOME BIOL. 25, 1, p. 112 112.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  4. Ibrutinib-associated focal segmental glomerulosclerosis and the impact of podocin mutations in chronic lymphocytic leukemia

    Czogalla, J., Schliffke, S., Lu, S., Schwerk, M., Petereit, H., Zhang, T., Liu, S., Dumoulin, B., Gies, S., Wu, G., Hänzelmann, S., Bode, M., Grahammer, F., Gödel, M., Voigtländer, M., Butt, L., Bokemeyer, C., Bergmann, C., Benzing, T., Wiech, T., Puelles, V. G. & Huber, T. B., 04.2024, In: KIDNEY INT. 105, 4, p. 877-881 5 p.

    Research output: SCORING: Contribution to journal › Letter › Research › peer-review

  5. Temporal change of DNA methylation subclasses between matched newly diagnosed and recurrent glioblastoma

    Drexler, R., Khatri, R., Schüller, U., Eckhardt, A., Ryba, A., Sauvigny, T., Dührsen, L., Mohme, M., Ricklefs, T., Bode, H., Hausmann, F., Huber, T. B., Bonn, S., Voß, H., Neumann, J. E., Silverbush, D., Hovestadt, V., Suvà, M. L., Lamszus, K., Gempt, J., Westphal, M., Heiland, D. H., Hänzelmann, S. & Ricklefs, F. L., 20.01.2024, In: ACTA NEUROPATHOL. 147, 1, p. 21

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  6. 2023

  7. A multi-omics dataset for the analysis of frontotemporal dementia genetic subtypes

    Menden, K., Francescatto, M., Nyima, T., Blauwendraat, C., Dhingra, A., Castillo-Lizardo, M., Fernandes, N., Kaurani, L., Kronenberg-Versteeg, D., Atasu, B., Sadikoglou, E., Borroni, B., Rodriguez-Nieto, S., Simon-Sanchez, J., Fischer, A., Craig, D. W., Neumann, M., Bonn, S., Rizzu, P. & Heutink, P., 01.12.2023, In: SCI DATA. 10, 1, p. 849

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  8. Testosterone affects type I/type II interferon response of neutrophils during hepatic amebiasis

    Er-Lukowiak, M., Hänzelmann, S., Rothe, M., Moamenpour, D. T., Hausmann, F., Khatri, R., Hansen, C., Boldt, J., Bärreiter, V. A., Honecker, B., Bea, A., Groneberg, M., Fehling, H., Marggraff, C., Cadar, D., Bonn, S., Sellau, J. & Lotter, H., 12.2023, In: FRONT IMMUNOL. 14, p. 1279245

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  9. Reduction of IFN-I responses by plasmacytoid dendritic cells in a longitudinal trans men cohort

    Grünhagel, B., Borggrewe, M., Hagen, S. H., Ziegler, S. M., Henseling, F., Glau, L., Thiele, R-J., Pujantell, M., Sivayoganathan, V., Padoan, B., Claussen, J. M., Düsedau, A., Hennesen, J., Bunders, M. J., Bonn, S., Tolosa, E., Krebs, C. F., Dorn, C. & Altfeld, M., 17.11.2023, In: ISCIENCE. 26, 11, p. 108209

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  10. Epigenetic profiling reveals a strong association between lack of 5-ALA fluorescence and EGFR amplification in IDH-wildtype glioblastoma

    Drexler, R., Sauvigny, T., Schüller, U., Eckhardt, A., Maire, C. L., Khatri, R., Hausmann, F., Hänzelmann, S., Huber, T. B., Bonn, S., Bode, H., Lamszus, K., Westphal, M., Dührsen, L. & Ricklefs, F. L., 10.2023, In: NEURO-ONCOL PRACT. 10, 5, p. 462-471 10 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  11. DISCERN: deep single-cell expression reconstruction for improved cell clustering and cell subtype and state detection

    Hausmann, F., Ergen, C., Khatri, R., Marouf, M., Hänzelmann, S., Gagliani, N., Huber, S., Machart, P. & Bonn, S., 20.09.2023, In: GENOME BIOL. 24, 1, p. 212

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  12. Proteomic analysis of the human hippocampus identifies neuronal pentraxin 1 (NPTX1) as synapto-axonal target in late-stage Parkinson's disease

    Warth Perez Arias, C. C., Silbern, I., Caldi Gomes, L., Wartmann, H., Dambeck, V., Fanz, J., Neuenroth, L., Bähr, M., Outeiro, T. F., Bonn, S., Stadelmann-Nessler, C., Rizzoli, S. O., Lenz, C., Urlaub, H. & Lingor, P., 09.2023, In: J NEUROCHEM. 166, 5, p. 862-874 13 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  13. Kidney outcome after mild to moderate COVID-19

    Schmidt-Lauber, C., Hänzelmann, S., Schunk, S., Petersen, E. L., Alabdo, A., Lindenmeyer, M., Hausmann, F., Kuta, P., Renné, T., Twerenbold, R., Zeller, T., Blankenberg, S., Fliser, D. & Huber, T. B., 31.08.2023, In: NEPHROL DIAL TRANSPL. 38, 9, p. 2031-2040 10 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  14. Epigenetic neural glioblastoma enhances synaptic integration and predicts therapeutic vulnerability

    Drexler, R., Khatri, R., Sauvigny, T., Mohme, M., Maire, C. L., Ryba, A., Zghaibeh, Y., Dührsen, L., Salviano-Silva, A., Lamszus, K., Westphal, M., Gempt, J., Wefers, A. K., Neumann, J., Bode, H., Hausmann, F., Huber, T. B., Bonn, S., Jütten, K., Delev, D., Weber, K. J., Harter, P. N., Onken, J., Vajkoczy, P., Capper, D., Wiestler, B., Weller, M., Snijder, B., Buck, A., Weiss, T., Keough, M. B., Ni, L., Monje, M., Silverbush, D., Hovestadt, V., Suvà, M. L., Krishna, S., Hervey-Jumper, S. L., Schüller, U., Heiland, D. H., Hänzelmann, S. & Ricklefs, F. L., 07.08.2023, In: bioRxiv.

    Research output: SCORING: Contribution to journal › Preprint › Research

  15. Transcriptional and Clonal Characterization of Cytotoxic T Cells in Crescentic Glomerulonephritis

    Mueller, A., Zhao, Y., Cicek, H., Paust, H-J., Sivayoganathan, A., Linke, A., Wegscheid, C., Wiech, T., Huber, T. B., Meyer-Schwesinger, C., Bonn, S., Prinz, I., Panzer, U., Tiegs, G., Krebs, C. F. & Neumann, K., 01.06.2023, In: J AM SOC NEPHROL. 34, 6, p. 1003-1018 16 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  16. Loss of TDP-43 causes ectopic endothelial sprouting and migration defects through increased fibronectin, vcam 1 and integrin α4/β1

    Hipke, K., Pitter, B., Hruscha, A., van Bebber, F., Modic, M., Bansal, V., Lewandowski, S. A., Orozco, D., Edbauer, D., Bonn, S., Haass, C., Pohl, U., Montanez, E. & Schmid, B., 06.2023, In: FRONT CELL DEV BIOL. 11, p. 1169962

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  17. Targeted anticonvulsive treatment of IDH-wildtype glioblastoma based on DNA methylation subclasses

    Drexler, R., Göttsche, J., Sauvigny, T., Schüller, U., Khatri, R., Hausmann, F., Hänzelmann, S., Huber, T. B., Bonn, S., Heiland, D. H., Delev, D., Venkataramani, V., Winkler, F., Weller, J., Zeyen, T., Herrlinger, U., Gempt, J., Ricklefs, F. L. & Dührsen, L., 04.05.2023, In: NEURO-ONCOLOGY. 25, 5, p. 1006-1008 3 p.

    Research output: SCORING: Contribution to journal › Letter › Research › peer-review

  18. DeePSC: A Deep Learning Model for Automated Diagnosis of Primary Sclerosing Cholangitis at Two-dimensional MR Cholangiopancreatography

    Ragab, H., Westhaeusser, F., Ernst, A., Yamamura, J., Fuhlert, P., Zimmermann, M., Sauerbeck, J., Shenas, F., Özden, C., Weidmann, A., Adam, G., Bonn, S. & Schramm, C., 05.2023, In: RADIOL-ARTIF INTELL. 5, 3, p. e220160

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  19. Performance comparison of TCR-pMHC prediction tools reveals a strong data dependency

    Deng, L., Ly, C., Abdollahi, S., Zhao, Y., Prinz, I. & Bonn, S., 18.04.2023, In: FRONT IMMUNOL. 14, p. 1128326

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  20. Expansion-enhanced super-resolution radial fluctuations enable nanoscale molecular profiling of pathology specimens

    Kylies, D., Zimmermann, M., Haas, F., Schwerk, M., Kuehl, M., Brehler, M., Czogalla, J., Hernandez, L. C., Konczalla, L., Okabayashi, Y., Menzel, J., Edenhofer, I., Mezher, S., Aypek, H., Dumoulin, B., Wu, H., Hofmann, S., Kretz, O., Wanner, N., Tomas, N. M., Krasemann, S., Glatzel, M., Kuppe, C., Kramann, R., Banjanin, B., Schneider, R. K., Urbschat, C., Arck, P., Gagliani, N., van Zandvoort, M., Wiech, T., Grahammer, F., Sáez, P. J., Wong, M. N., Bonn, S., Huber, T. B. & Puelles, V. G., 04.2023, In: NAT NANOTECHNOL. 18, 4, p. 336-342 7 p.

    Research output: SCORING: Contribution to journal › Letter › Research › peer-review

  21. CD4+ T cells produce GM-CSF and drive immune-mediated glomerular disease by licensing monocyte-derived cells to produce MMP12

    Paust, H-J., Song, N., De Feo, D., Asada, N., Tuzlak, S., Zhao, Y., Riedel, J-H., Hellmig, M., Sivayoganathan, A., Peters, A., Kaffke, A., Borchers, A., Wenzel, U. O., Steinmetz, O. M., Tiegs, G., Meister, E., Mack, M., Kurts, C., von Vietinghoff, S., Lindenmeyer, M. T., Hoxha, E., Stahl, R. A. K., Huber, T. B., Bonn, S., Meyer-Schwesinger, C., Wiech, T., Turner, J-E., Becher, B., Krebs, C. F. & Panzer, U., 15.03.2023, In: SCI TRANSL MED. 15, 687, eadd6137.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  22. Pathogen detection in RNA-seq data with Pathonoia

    Liebhoff, A-M., Menden, K., Laschtowitz, A., Franke, A., Schramm, C. & Bonn, S., 17.02.2023, In: BMC BIOINFORMATICS. 24, 1, 53.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  23. Glucocorticoids target the CXCL9/CXCL10-CXCR3 axis and confer protection against immune-mediated kidney injury

    Riedel, J-H., Robben, L., Paust, H-J., Zhao, Y., Asada, N., Song, N., Peters, A., Kaffke, A., Borchers, A. C., Tiegs, G., Seifert, L., Tomas, N. M., Hoxha, E., Wenzel, U. O., Huber, T. B., Wiech, T., Turner, J-E., Krebs, C. F. & Panzer, U., 10.01.2023, In: JCI INSIGHT. 8, 1, e160251.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  24. Multicytokine-producing CD4+ T cells characterize the livers of patients with NASH

    Woestemeier, A., Scognamiglio, P., Zhao, Y., Wagner, J., Muscate, F., Casar, C., Siracusa, F., Cortesi, F., Agalioti, T., Müller, S., Sagebiel, A., Konczalla, L., Wahib, R., Karstens, K-F., Giannou, A. D., Duprée, A., Wolter, S., Wong, M. N., Mühlig, A. K., Bielecka, A. A., Bansal, V., Zhang, T., Mann, O., Puelles, V. G., Huber, T. B., Lohse, A. W., Izbicki, J. R., Palm, N. W., Bonn, S., Huber, S. & Gagliani, N., 10.01.2023, In: JCI INSIGHT. 8, 1, e153831.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  25. Single-cell transcriptomics reveals a mechanosensitive injury signaling pathway in early diabetic nephropathy

    Liu, S., Zhao, Y., Lu, S., Zhang, T., Lindenmeyer, M. T., Nair, V., Gies, S. E., Wu, G., Nelson, R. G., Czogalla, J., Aypek, H., Zielinski, S., Liao, Z., Schaper, M., Fermin, D., Cohen, C. D., Delic, D., Krebs, C. F., Grahammer, F., Wiech, T., Kretzler, M., Meyer-Schwesinger, C., Bonn, S. & Huber, T. B., 10.01.2023, In: GENOME MED. 15, 1, p. 2

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  26. 2022

  27. ERR2 and ERR3 promote the development of gamma motor neuron functional properties required for proprioceptive movement control

    Khan, M. N., Cherukuri, P., Negro, F., Rajput, A., Fabrowski, P., Bansal, V., Lancelin, C., Lee, T-I., Bian, Y., Mayer, W. P., Akay, T., Müller, D., Bonn, S., Farina, D. & Marquardt, T., 21.12.2022, In: PLOS BIOL. 20, 12, e3001923.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  28. Correction: Tagger-A Swiss army knife for multiomics to dissect cell type-specific mechanisms of gene expression in mice

    Kaczmarczyk, L., Bansal, V., Rajput, A., Rahman, R-U., Krzyżak, W., Degen, J., Poll, S., Fuhrmann, M., Bonn, S. & Jackson, W. S., 01.11.2022, In: PLOS BIOL. 20, 11, e3001882.

    Research output: SCORING: Contribution to journal › Other (editorial matter etc.) › Research

  29. Pregnancy-induced maternal microchimerism shapes neurodevelopment and behavior in mice

    Schepanski, S., Chini, M., Sternemann, V., Urbschat, C., Thiele, K., Sun, T., Zhao, Y., Poburski, M., Woestemeier, A., Thieme, M-T., Zazara, D. E., Alawi, M., Fischer, N., Heeren, J., Vladimirov, N., Woehler, A., Puelles, V. G., Bonn, S., Gagliani, N., Hanganu-Opatz, I. L. & Arck, P. C., 05.08.2022, In: NAT COMMUN. 13, 1, 4571.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  30. Distinct translatome changes in specific neural populations precede electroencephalographic changes in prion-infected mice

    Kaczmarczyk, L., Schleif, M., Dittrich, L., Williams, R. H., Koderman, M., Bansal, V., Rajput, A., Schulte, T., Jonson, M., Krost, C., Testaquadra, F. J., Bonn, S. & Jackson, W. S., 08.2022, In: PLOS PATHOG. 18, 8, e1010747.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  31. Th17 cell plasticity towards a T-bet-dependent Th1 phenotype is required for bacterial control in Staphylococcus aureus infection

    Bartsch, P., Kilian, C., Hellmig, M., Paust, H-J., Borchers, A., Sivayoganathan, A., Enk, L., Zhao, Y., Shaikh, N., Büttner, H., Wong, M. N., Puelles, V. G., Wiech, T., Flavell, R., Huber, T. B., Turner, J-E., Bonn, S., Huber, S., Gagliani, N., Mittrücker, H-W., Rohde, H., Panzer, U. & Krebs, C. F., 04.2022, In: PLOS PATHOG. 18, 4, p. e1010430

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  32. 2021

  33. Towards Explainable End-to-End Prostate Cancer Relapse Prediction from H&E Images Combining Self-Attention Multiple Instance Learning with a Recurrent Neural Network

    Dietrich, E., Fuhlert, P., Ernst, A., Sauter, G., Lennartz, E. M. H., Stiehl, S., Zimmermann, M. & Bonn, S., 26.11.2021, Machine Learning for Health (ML4H) 2021: Proceedings of Machine Learning Research LEAVE UNSET:1–16, 2021. Cornell University, Vol. 158. p. 38-53 16 p.

    Research output: SCORING: Contribution to book/anthology › Conference contribution - Poster › Research

  34. Neuronal cholesterol synthesis is essential for repair of chronically demyelinated lesions in mice

    Berghoff, S. A., Spieth, L., Sun, T., Hosang, L., Depp, C., Sasmita, A. O., Vasileva, M. H., Scholz, P., Zhao, Y., Krueger-Burg, D., Wichert, S., Brown, E. R., Michail, K., Nave, K-A., Bonn, S., Odoardi, F., Rossner, M., Ischebeck, T., Edgar, J. M. & Saher, G., 26.10.2021, In: CELL REP. 37, 4, 109889.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  35. Bias-invariant RNA-sequencing metadata annotation

    Wartmann, H., Heins, S., Kloiber, K. & Bonn, S., 22.09.2021, In: GIGASCIENCE. 10, 9, p. giab064

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  36. Landscape of T-cell repertoires with public COVID-19-associated T-cell receptors in pre-pandemic risk cohorts

    Simnica, D., Schultheiß, C., Mohme, M., Paschold, L., Willscher, E., Fitzek, A., Püschel, K., Matschke, J., Ciesek, S., Sedding, D. G., Zhao, Y., Gagliani, N., Maringer, Y., Walz, J. S., Heide, J., Schulze-Zur-Wiesch, J. & Binder, M., 28.08.2021, In: CLIN TRANSL IMMUNOL. 10, 9, p. e1340 e1340.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  37. DeepGRP: engineering a software tool for predicting genomic repetitive elements using Recurrent Neural Networks with attention

    Hausmann, F. & Kurtz, S., 23.08.2021, In: ALGORITHM MOL BIOL. 16, 1, p. 20 20.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  38. Histological activity despite normal ALT and IgG serum levels in patients with autoimmune hepatitis and cirrhosis

    Laschtowitz, A., Zachou, K., Lygoura, V., Pape, S., Derben, F., Jaeckel, E., Oller-Moreno, S., Weidemann, S., Krech, T., Piecha, F., Schön, G., Liebhoff, A-M., Al Tarrah, M., Heneghan, M., Drenth, J. P. H., Dalekos, G., Taubert, R., Lohse, A. W. & Schramm, C., 08.2021, In: JHEP REP. 3, 4, p. 100321

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  39. Single-cell biology to decode the immune cellular composition of kidney inflammation.

    Zhao, Y., Panzer, U., Bonn, S. & Krebs, C., 08.2021, In: CELL TISSUE RES. 385, 2, p. 435-443 9 p.

    Research output: SCORING: Contribution to journal › SCORING: Review article › Research

  40. Deep Learning-Based Bias Transfer for Overcoming Laboratory Differences of Microscopic Images

    Thebille, A-K., Dietrich, E., Klaus, M., Gernhold, L., Lennartz, E. M. H., Kuppe, C., Kramann, R., Huber, T., Sauter, G., Puelles, V., Zimmermann, M. & Bonn, S., 06.07.2021, Annual Conference on Medical Image Understanding and Analysis: 25th Annual Conference, MIUA 2021, Oxford, United Kingdom, July 12–14, 2021, Proceedings. Papież, B. W., Yaqub, M., Jiao, J., Namburete, A. I. L. & Noble, J. A. (eds.). 1 ed. Oxford: Springer Nature Switzerland AG, p. 322-336 15 p.

    Research output: SCORING: Contribution to book/anthology › Conference contribution - Article for conference › Research › peer-review

  41. Pro-cachectic factors link experimental and human chronic kidney disease to skeletal muscle wasting programs

    Solagna, F., Tezze, C., Lindenmeyer, M. T., Lu, S., Wu, G., Liu, S., Zhao, Y., Mitchell, R., Meyer, C., Omairi, S., Kilic, T., Paolini, A., Ritvos, O., Pasternack, A., Matsakas, A., Kylies, D., Wiesch, J. S. Z., Turner, J-E., Wanner, N., Nair, V., Eichinger, F., Menon, R., Martin, I. V., Klinkhammer, B. M., Hoxha, E., Cohen, C. D., Tharaux, P-L., Boor, P., Ostendorf, T., Kretzler, M., Sandri, M., Kretz, O., Puelles, V. G., Patel, K. & Huber, T. B., 01.06.2021, In: J CLIN INVEST. 131, 11, e135821.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  42. Hippocampal neurons respond to brain activity with functional hypoxia

    Butt, U. J., Steixner-Kumar, A. A., Depp, C., Sun, T., Hassouna, I., Wüstefeld, L., Arinrad, S., Zillmann, M. R., Schopf, N., Fernandez Garcia-Agudo, L., Mohrmann, L., Bode, U., Ronnenberg, A., Hindermann, M., Goebbels, S., Bonn, S., Katschinski, D. M., Miskowiak, K. W., Nave, K-A. & Ehrenreich, H., 06.2021, In: MOL PSYCHIATR. 26, 6, p. 1790-1807 18 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  43. Interactive gene networks with KNIT

    Magruder, D. S., Liebhoff, A. M., Bethune, J. & Bonn, S., 19.04.2021, In: BIOINFORMATICS. 37, 2, p. 276-278 3 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  44. Deep learning-based molecular morphometrics for kidney biopsies

    Zimmermann, M., Klaus, M., Wong, M. N., Thebille, A-K., Gernhold, L., Kuppe, C., Halder, M., Kranz, J., Wanner, N., Braun, F., Wulf, S., Wiech, T., Panzer, U., Krebs, C. F., Hoxha, E., Kramann, R., Huber, T. B., Bonn, S. & Puelles, V. G., 08.04.2021, In: JCI INSIGHT. 6, 7, p. e144779

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  45. Altered gut microbial metabolism of essential nutrients in primary sclerosing cholangitis

    Kummen, M., Thingholm, L. B., Rühlemann, M. C., Holm, K., Hansen, S. H., Moitinho-Silva, L., Liwinski, T., Zenouzi, R., Storm-Larsen, C., Midttun, Ø., McCann, A., Ueland, P. M., Høivik, M. L., Vesterhus, M., Trøseid, M., Laudes, M., Lieb, W., Karlsen, T. H., Bang, C., Schramm, C., Franke, A. & Hov, J. R., 04.2021, In: GASTROENTEROLOGY. 160, 5, p. 1784-1798.e0 15 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  46. Algorithmic advances in machine learning for single-cell expression analysis

    Oller, S., Kloiber, K., Machart, P. & Bonn, S., 03.2021, In: CURR OPIN SYST BIOL. 2021, 25, p. 27-33 7 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  47. Clonal expansion and activation of tissue-resident memory-like Th17 cells expressing GM-CSF in the lungs of severe COVID-19 patients

    Zhao, Y., Kilian, C., Turner, J. E., Bosurgi, L., Roedl, K., Bartsch, P., Gnirck, A. C., Cortesi, F., Schultheiß, C., Hellmig, M., Enk, L. U. B., Hausmann, F., Borchers, A., Wong, M. N., Paust, H. J., Siracusa, F., Scheibel, N., Herrmann, M., Rosati, E., Bacher, P., Kylies, D., Jarczak, D., Lütgehetmann, M., Pfefferle, S., Steurer, S., Zur Wiesch, J. S., Puelles, V. G., Sperhake, J. P., Addo, M. M., Lohse, A. W., Binder, M., Huber, S., Huber, T. B., Kluge, S., Bonn, S., Panzer, U., Gagliani, N. & Krebs, C. F., 23.02.2021, In: SCI IMMUNOL. 6, 56, eabf6692.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  48. Protein phosphorylation in depolarized synaptosomes: Dissecting primary effects of calcium from synaptic vesicle cycling

    Silbern, I., Pan, K-T., Fiosins, M., Bonn, S., Rizzoli, S. O., Fornasiero, E. F., Urlaub, H. & Jahn, R., 12.02.2021, In: MOL CELL PROTEOMICS. 20, 100061.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  49. 2020

  50. Neuropathology of patients with COVID-19 in Germany: a post-mortem case series

    Matschke, J., Lütgehetmann, M., Hagel, C., Sperhake, J. P., Schröder, A. S., Edler, C., Mushumba, H., Fitzek, A., Allweiss, L., Dandri, M., Dottermusch, M., Heinemann, A., Pfefferle, S., Schwabenland, M., Sumner Magruder, D., Bonn, S., Prinz, M., Gerloff, C., Püschel, K., Krasemann, S., Aepfelbacher, M. & Glatzel, M., 11.2020, In: LANCET NEUROL. 19, 11, p. 919-929 11 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  51. SUMOylation controls the neurodevelopmental function of the transcription factor Zbtb20

    Ripamonti, S., Shomroni, O., Rhee, J. S., Chowdhury, K., Jahn, O., Hellmann, K. P., Bonn, S., Brose, N. & Tirard, M., 09.2020, In: J NEUROCHEM. 154, 6, p. 647-661 15 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  52. Pathogen-induced tissue-resident memory TH17 (TRM17) cells amplify autoimmune kidney disease

    Krebs, C. F., Reimers, D., Zhao, Y., Paust, H-J., Bartsch, P., Nuñez, S., Rosemblatt, M. V., Hellmig, M., Kilian, C., Borchers, A., Enk, L. U. B., Zinke, M., Becker, M., Schmid, J., Klinge, S., Wong, M. N., Puelles, V. G., Schmidt, C., Bertram, T., Stumpf, N., Hoxha, E., Meyer-Schwesinger, C., Lindenmeyer, M. T., Cohen, C. D., Rink, M., Kurts, C., Franzenburg, S., Koch-Nolte, F., Turner, J-E., Riedel, J-H., Huber, S., Gagliani, N., Huber, T. B., Wiech, T., Rohde, H., Bono, M. R., Bonn, S., Panzer, U. & Mittrücker, H-W., 07.08.2020, In: SCI IMMUNOL. 5, 50, eaba4163.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  53. Deep learning-based cell composition analysis from tissue expression profiles

    Menden, K., Marouf, M., Oller, S., Dalmia, A., Magruder, D. S., Kloiber, K., Heutink, P. & Bonn, S., 22.07.2020, In: SCI ADV. 6, 30, p. eaba2619

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  54. Functional hypoxia drives neuroplasticity and neurogenesis via brain erythropoietin

    Wakhloo, D., Scharkowski, F., Curto, Y., Javed Butt, U., Bansal, V., Steixner-Kumar, A. A., Wüstefeld, L., Rajput, A., Arinrad, S., Zillmann, M. R., Seelbach, A., Hassouna, I., Schneider, K., Qadir Ibrahim, A., Werner, H. B., Martens, H., Miskowiak, K., Wojcik, S. M., Bonn, S., Nacher, J., Nave, K-A. & Ehrenreich, H., 09.03.2020, In: NAT COMMUN. 11, 1, p. 1313

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  55. CRISPLD1: a novel conserved target in the transition to human heart failure

    Khadjeh, S., Hindmarsh, V., Weber, F., Cyganek, L., Vidal, R. O., Torkieh, S., Streckfuss-Bömeke, K., Lbik, D., Tiburcy, M., Mohamed, B. A., Bonn, S., Toischer, K. & Hasenfuss, G., 07.03.2020, In: BASIC RES CARDIOL. 115, 3, p. 27

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

Previous 1 2 Next