Research ExplorerResearch UnitsInstitute of Medical Systems Biology Publications

Institute of Medical Systems Biology

51 - 69 out of 69Page size: 50

Publications

  1. 2020

  2. Explainable Deep Learning for Augmentation of Small RNA Expression Profiles

    Fiosina, J., Fiosins, M. & Bonn, S., 01.02.2020, In: J COMPUT BIOL.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  3. Realistic in silico generation and augmentation of single-cell RNA-seq data using generative adversarial networks

    Marouf, M., Machart, P., Bansal, V., Kilian, C., Magruder, D. S., Krebs, C. F. & Bonn, S., 09.01.2020, In: NAT COMMUN. 11, 1, p. 166

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  4. SEAweb: the small RNA Expression Atlas web application

    Rahman, R-U., Liebhoff, A-M., Bansal, V., Fiosins, M., Rajput, A., Sattar, A., Magruder, D. S., Madan, S., Sun, T., Gautam, A., Heins, S., Liwinski, T., Bethune, J., Trenkwalder, C., Fluck, J., Mollenhauer, B. & Bonn, S., 08.01.2020, In: NUCLEIC ACIDS RES. 48, D1, p. D204-D219

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  5. Organ-specific small non-coding RNA responses in domestic (Sudani) ducks experimentally infected with highly pathogenic avian influenza virus (H5N1)

    Samir, M., Vidal, R. O., Abdallah, F., Capece, V., Seehusen, F., Geffers, R., Hussein, A., Ali, A. A. H., Bonn, S. & Pessler, F., 01.2020, In: RNA BIOL. 17, 1, p. 112-124 13 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  6. 2019

  7. The long noncoding RNA neuroLNC regulates presynaptic activity by interacting with the neurodegeneration-associated protein TDP-43

    Keihani, S., Kluever, V., Mandad, S., Bansal, V., Rahman, R., Fritsch, E., Gomes, L. C., Gärtner, A., Kügler, S., Urlaub, H., Wren, J. D., Bonn, S., Rizzoli, S. O. & Fornasiero, E. F., 18.12.2019, In: SCI ADV. 5, 12, p. eaay2670

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  8. Violent aggression predicted by multiple pre-adult environmental hits

    Mitjans, M., Seidel, J., Begemann, M., Bockhop, F., Moya-Higueras, J., Bansal, V., Wesolowski, J., Seelbach, A., Ibáñez, M. I., Kovacevic, F., Duvar, O., Fañanás, L., Wolf, H-U., Ortet, G., Zwanzger, P., Klein, V., Lange, I., Tänzer, A., Dudeck, M., Penke, L., van Elst, L. T., Bittner, R. A., Schmidmeier, R., Freese, R., Müller-Isberner, R., Wiltfang, J., Bliesener, T., Bonn, S., Poustka, L., Müller, J. L., Arias, B. & Ehrenreich, H., 10.2019, In: MOL PSYCHIATR. 24, 10, p. 1549-1564 16 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  9. Tagger-A Swiss army knife for multiomics to dissect cell type-specific mechanisms of gene expression in mice

    Kaczmarczyk, L., Bansal, V., Rajput, A., Rahman, R-U., Krzyżak, W., Degen, J., Poll, S., Fuhrmann, M., Bonn, S. & Jackson, W. S., 08.2019, In: PLOS BIOL. 17, 8, p. e3000374

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  10. DNA Methyltransferase 1 Controls Nephron Progenitor Cell Renewal and Differentiation

    Wanner, N., Vornweg, J., Combes, A., Wilson, S., Plappert, J., Rafflenbeul, G., Puelles, V. G., Rahman, R-U., Liwinski, T., Lindner, S., Grahammer, F., Kretz, O., Wlodek, M. E., Romano, T., Moritz, K. M., Boerries, M., Busch, H., Bonn, S., Little, M. H., Bechtel-Walz, W. & Huber, T. B., 01.2019, In: J AM SOC NEPHROL. 30, 1, p. 63-78 16 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  11. 2018

  12. The codon sequences predict protein lifetimes and other parameters of the protein life cycle in the mouse brain

    Mandad, S., Rahman, R-U., Centeno, T. P., Vidal, R. O., Wildhagen, H., Rammner, B., Keihani, S., Opazo, F., Urban, I., Ischebeck, T., Kirli, K., Benito, E., Fischer, A., Yousefi, R. Y., Dennerlein, S., Rehling, P., Feussner, I., Urlaub, H., Bonn, S., Rizzoli, S. O. & Fornasiero, E. F., 15.11.2018, In: SCI REP-UK. 8, 1, p. 16913

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  13. Precisely measured protein lifetimes in the mouse brain reveal differences across tissues and subcellular fractions

    Fornasiero, E. F., Mandad, S., Wildhagen, H., Alevra, M., Rammner, B., Keihani, S., Opazo, F., Urban, I., Ischebeck, T., Sakib, M. S., Fard, M. K., Kirli, K., Centeno, T. P., Vidal, R. O., Rahman, R-U., Benito, E., Fischer, A., Dennerlein, S., Rehling, P., Feussner, I., Bonn, S., Simons, M., Urlaub, H. & Rizzoli, S. O., 12.10.2018, In: NAT COMMUN. 9, 1, p. 4230

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  14. Genome-wide association study results for educational attainment aid in identifying genetic heterogeneity of schizophrenia

    Bansal, V., Mitjans, M., Burik, C. A. P., Linnér, R. K., Okbay, A., Rietveld, C. A., Begemann, M., Bonn, S., Ripke, S., de Vlaming, R., Nivard, M. G., Ehrenreich, H. & Koellinger, P. D., 06.08.2018, In: NAT COMMUN. 9, 1, p. 3078

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  15. Targeting myelin lipid metabolism as a potential therapeutic strategy in a model of CMT1A neuropathy

    Fledrich, R., Abdelaal, T., Rasch, L., Bansal, V., Schütza, V., Brügger, B., Lüchtenborg, C., Prukop, T., Stenzel, J., Rahman, R. U., Hermes, D., Ewers, D., Möbius, W., Ruhwedel, T., Katona, I., Weis, J., Klein, D., Martini, R., Brück, W., Müller, W. C., Bonn, S., Bechmann, I., Nave, K. A., Stassart, R. M. & Sereda, M. W., 02.08.2018, In: NAT COMMUN. 9, 1, p. 3025

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  16. Molecular Evolution and Functional Divergence of the IgLON Family

    Kubick, N., Brösamle, D. & Mickael, M-E., 21.05.2018, In: EVOL BIOINFORM. 14, p. 1176934318775081

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  17. Epigenetic alterations in longevity regulators, reduced life span, and exacerbated aging-related pathology in old father offspring mice

    Xie, K., Ryan, D. P., Pearson, B. L., Henzel, K. S., Neff, F., Vidal, R. O., Hennion, M., Lehmann, I., Schleif, M., Schröder, S., Adler, T., Rathkolb, B., Rozman, J., Schütz, A-L., Prehn, C., Mickael, M. E., Weiergräber, M., Adamski, J., Busch, D. H., Ehninger, G., Matynia, A., Jackson, W. S., Wolf, E., Fuchs, H., Gailus-Durner, V., Bonn, S., Hrabě de Angelis, M. & Ehninger, D., 06.03.2018, In: P NATL ACAD SCI USA. 115, 10, p. E2348-E2357

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  18. Oasis 2: improved online analysis of small RNA-seq data

    Rahman, R-U., Gautam, A., Bethune, J., Sattar, A., Fiosins, M., Magruder, D. S., Capece, V., Shomroni, O. & Bonn, S., 14.02.2018, In: BMC BIOINFORMATICS. 19, 1, p. 54

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  19. Regional and subtype-dependent miRNA signatures in sporadic Creutzfeldt-Jakob disease are accompanied by alterations in miRNA silencing machinery and biogenesis

    Llorens, F., Thüne, K., Martí, E., Kanata, E., Dafou, D., Díaz-Lucena, D., Vivancos, A., Shomroni, O., Zafar, S., Schmitz, M., Michel, U., Fernández-Borges, N., Andréoletti, O., Del Río, J. A., Díez, J., Fischer, A., Bonn, S., Sklaviadis, T., Torres, J. M., Ferrer, I. & Zerr, I., 22.01.2018, In: PLOS PATHOG. 14, 1, p. e1006802

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  20. Upregulation of miR-370 and miR-543 is associated with reduced expression of heat shock protein 40 in spinocerebellar ataxia type 3

    Evert, B. O., Nalavade, R., Jungverdorben, J., Matthes, F., Weber, S., Rajput, A., Bonn, S., Brüstle, O., Peitz, M. & Krauß, S., 2018, In: PLOS ONE. 13, 8, p. e0201794

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  21. 2017

  22. The landscape of human mutually exclusive splicing

    Hatje, K., Rahman, R-U., Vidal, R. O., Simm, D., Hammesfahr, B., Bansal, V., Rajput, A., Mickael, M. E., Sun, T., Bonn, S. & Kollmar, M., 14.12.2017, In: MOL SYST BIOL. 13, 12, 959.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  23. Severe DCM phenotype of patient harboring RBM20 mutation S635A can be modeled by patient-specific induced pluripotent stem cell-derived cardiomyocytes

    Streckfuss-Bömeke, K., Tiburcy, M., Fomin, A., Luo, X., Li, W., Fischer, C., Özcelik, C., Perrot, A., Sossalla, S., Haas, J., Vidal, R. O., Rebs, S., Khadjeh, S., Meder, B., Bonn, S., Linke, W. A., Zimmermann, W-H., Hasenfuss, G. & Guan, K., 12.2017, In: J MOL CELL CARDIOL. 113, p. 9-21 13 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

Previous 1 2 Next