New clustering module in BDPC bisulfite sequencing data presentation and compilation web application for DNA methylation analyses.
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New clustering module in BDPC bisulfite sequencing data presentation and compilation web application for DNA methylation analyses. / Rohde, Christian; Zhang, Yingying; Stamerjohanns, Heinrich; Hecher, Kurt; Reinhardt, Richard; Jeltsch, Albert.
In: BIOTECHNIQUES, Vol. 47, No. 3, 3, 2009, p. 781-783.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
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TY - JOUR
T1 - New clustering module in BDPC bisulfite sequencing data presentation and compilation web application for DNA methylation analyses.
AU - Rohde, Christian
AU - Zhang, Yingying
AU - Stamerjohanns, Heinrich
AU - Hecher, Kurt
AU - Reinhardt, Richard
AU - Jeltsch, Albert
PY - 2009
Y1 - 2009
N2 - The Bisulfite Sequencing Data Presentation and Compilation (BDPC) web interface for compilation and presentation of data from bisulfite sequencing DNA methylation studies has been improved by adding a new module. This module allows visualization of the whole data set in form of a heatmap of DNA methylation levels and clustering and comparison of tissue methylation patterns. It can also be used for data not processed by BDPC. In addition, several functions of the existing BDPC compilation module have been improved.
AB - The Bisulfite Sequencing Data Presentation and Compilation (BDPC) web interface for compilation and presentation of data from bisulfite sequencing DNA methylation studies has been improved by adding a new module. This module allows visualization of the whole data set in form of a heatmap of DNA methylation levels and clustering and comparison of tissue methylation patterns. It can also be used for data not processed by BDPC. In addition, several functions of the existing BDPC compilation module have been improved.
U2 - 10.2144/000113196
DO - 10.2144/000113196
M3 - SCORING: Zeitschriftenaufsatz
VL - 47
SP - 781
EP - 783
JO - BIOTECHNIQUES
JF - BIOTECHNIQUES
SN - 0736-6205
IS - 3
M1 - 3
ER -