New clustering module in BDPC bisulfite sequencing data presentation and compilation web application for DNA methylation analyses.

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New clustering module in BDPC bisulfite sequencing data presentation and compilation web application for DNA methylation analyses. / Rohde, Christian; Zhang, Yingying; Stamerjohanns, Heinrich; Hecher, Kurt; Reinhardt, Richard; Jeltsch, Albert.

in: BIOTECHNIQUES, Jahrgang 47, Nr. 3, 3, 2009, S. 781-783.

Publikationen: SCORING: Beitrag in Fachzeitschrift/ZeitungSCORING: ZeitschriftenaufsatzForschungBegutachtung

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Bibtex

@article{32f11c446af846739c9d4a368b107b6a,
title = "New clustering module in BDPC bisulfite sequencing data presentation and compilation web application for DNA methylation analyses.",
abstract = "The Bisulfite Sequencing Data Presentation and Compilation (BDPC) web interface for compilation and presentation of data from bisulfite sequencing DNA methylation studies has been improved by adding a new module. This module allows visualization of the whole data set in form of a heatmap of DNA methylation levels and clustering and comparison of tissue methylation patterns. It can also be used for data not processed by BDPC. In addition, several functions of the existing BDPC compilation module have been improved.",
author = "Christian Rohde and Yingying Zhang and Heinrich Stamerjohanns and Kurt Hecher and Richard Reinhardt and Albert Jeltsch",
year = "2009",
doi = "10.2144/000113196",
language = "Deutsch",
volume = "47",
pages = "781--783",
journal = "BIOTECHNIQUES",
issn = "0736-6205",
publisher = "Eaton Publishing Company",
number = "3",

}

RIS

TY - JOUR

T1 - New clustering module in BDPC bisulfite sequencing data presentation and compilation web application for DNA methylation analyses.

AU - Rohde, Christian

AU - Zhang, Yingying

AU - Stamerjohanns, Heinrich

AU - Hecher, Kurt

AU - Reinhardt, Richard

AU - Jeltsch, Albert

PY - 2009

Y1 - 2009

N2 - The Bisulfite Sequencing Data Presentation and Compilation (BDPC) web interface for compilation and presentation of data from bisulfite sequencing DNA methylation studies has been improved by adding a new module. This module allows visualization of the whole data set in form of a heatmap of DNA methylation levels and clustering and comparison of tissue methylation patterns. It can also be used for data not processed by BDPC. In addition, several functions of the existing BDPC compilation module have been improved.

AB - The Bisulfite Sequencing Data Presentation and Compilation (BDPC) web interface for compilation and presentation of data from bisulfite sequencing DNA methylation studies has been improved by adding a new module. This module allows visualization of the whole data set in form of a heatmap of DNA methylation levels and clustering and comparison of tissue methylation patterns. It can also be used for data not processed by BDPC. In addition, several functions of the existing BDPC compilation module have been improved.

U2 - 10.2144/000113196

DO - 10.2144/000113196

M3 - SCORING: Zeitschriftenaufsatz

VL - 47

SP - 781

EP - 783

JO - BIOTECHNIQUES

JF - BIOTECHNIQUES

SN - 0736-6205

IS - 3

M1 - 3

ER -