New clustering module in BDPC bisulfite sequencing data presentation and compilation web application for DNA methylation analyses.

  • Christian Rohde
  • Yingying Zhang
  • Heinrich Stamerjohanns
  • Kurt Hecher
  • Richard Reinhardt
  • Albert Jeltsch

Abstract

The Bisulfite Sequencing Data Presentation and Compilation (BDPC) web interface for compilation and presentation of data from bisulfite sequencing DNA methylation studies has been improved by adding a new module. This module allows visualization of the whole data set in form of a heatmap of DNA methylation levels and clustering and comparison of tissue methylation patterns. It can also be used for data not processed by BDPC. In addition, several functions of the existing BDPC compilation module have been improved.

Bibliographical data

Original languageGerman
Article number3
ISSN0736-6205
DOIs
Publication statusPublished - 2009
pubmed 19852764