Institute of Computational Neuroscience

Publications

  1. Reduced rich-club connectivity is related to disability in primary progressive MS

    Stellmann, J-P., Hodecker, S., Cheng, B., Wanke, N., Young, K. L., Hilgetag, C., Gerloff, C., Heesen, C., Thomalla, G. & Siemonsen, S., 09.2017, In: NEUROL-NEUROIMMUNOL. 4, 5, p. e375

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  2. In Memoriam: Rolf Kötter (1961 2010)

    Stephan, K. E., McIntosh, A. R. & Hilgetag, C., 2010, In: PLOS COMPUT BIOL. 6, 10, p. 1000965 10.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  3. Computational analysis of functional connectivity between areas of primate cerebral cortex

    Stephan, K. E., Hilgetag, C. C., Burns, G. A., O'Neill, M. A., Young, M. P. & Kötter, R., 29.01.2000, In: PHILOS T R SOC B. 355, 1393, p. 111-26 16 p.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  4. Reverse inference of memory retrieval processes underlying metacognitive monitoring of learning using multivariate pattern analysis

    Stiers, P., Falbo, L., Goulas, A., van Gog, T. & de Bruin, A., 15.05.2016, In: NEUROIMAGE. 132, p. 11-23 13 p.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  5. Functional connectivity of task context representations in prefrontal nodes of the multiple demand network

    Stiers, P. & Goulas, A., 06.2018, In: BRAIN STRUCT FUNCT. 223, 5, p. 2455-2473 19 p.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  6. Task-specific subnetworks extend from prefrontal cortex to striatum

    Stiers, P. & Goulas, A., 11.2022, In: CORTEX. 156, p. 106-125 20 p.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  7. Building the Ferretome

    Sukhinin, D. I., Engel, A. K., Manger, P. & Hilgetag, C. C., 2016, In: FRONT NEUROINFORM. 10, p. 16

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  8. Automatische Detektion von Aneurysmen in 3D Time-of-Flight Magnetresonanzangiographie Datensätzen

    Suniaga, S., Werner, R., Kemmling, A., Groth, M., Fiehler, J. & Forkert, N., 2012, GI-Edition - Lecture Notes in Informatics (LNI), P-208. Bonner Köllen Verlag, p. 1738-1744 7 p.

    Research output: SCORING: Contribution to book/anthologySCORING: Contribution to collected editions/anthologiesResearchpeer-review

  9. Computer-Aided Detection of Aneurysms in 3D Time-of-Flight MRA Datasets

    Suniaga, S., Werner, R., Kemmling, A., Groth, M., Fiehler, J. & Forkert, N., 2012, Machine Learning in Medical Imaging - Lecture Notes in Computer Science Volume 7588. Springer Berlin Heidelberg, p. 63-69 7 p.

    Research output: SCORING: Contribution to book/anthologySCORING: Contribution to collected editions/anthologiesResearchpeer-review

  10. First clinical evaluation of breathing controlled four-dimensional computed tomography imaging

    Szkitsak, J., Werner, R., Fernolendt, S., Schwarz, A., Ott, O. J., Fietkau, R., Hofmann, C. & Bert, C., 10.2021, In: PHYS IMAG RADIAT ONC. 20, p. 56-61 6 p.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  11. [3-D visualization of dose distributions in CT image volumes]

    Tabbert, E., Riemer, M., Schiemann, T., Tiede, U. & Höhne, K. H., 1992, In: STRAHLENTHER ONKOL. 168, 1, p. 31-34 1.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  12. Groupwise Registration for Robust Motion Field Estimation in Artifact-Affected 4D CT Images

    Tack, A., Kobayashi, Y., Gauer, T., Schlaefer, A. & Werner, R., 10.2015, MICCAI Workshop on Imaging and Computer Assistance in Radiation Therapy Workshop (ICART). 1 ed. p. 18-25 8 p.

    Research output: SCORING: Contribution to book/anthologySCORING: Contribution to collected editions/anthologiesResearchpeer-review

  13. “Soccer player’s heart": assessment of left ventricular adaptation by cardiac magnetic resonance imaging.

    Tahir, E., Regier, M., Sinn, M., Säring, D., Radunski, U. K., Adam, G. & Lund, G., 03.02.2015, Journal of Cardiovascular Magnetic Resonance.

    Research output: SCORING: Contribution to book/anthologyConference contribution - Published abstract for conference with selection processResearchpeer-review

  14. Serial native T1- and T2-mapping to quantitatively monitor resorption of myocardial edema following acute myocardial infarction.

    Tahir, E., Sinn, M., Avanesov, M., Radunski, U. K., Säring, D., Stehning, C., Müllerleile, K., Schnackenburg, B., Adam, G. & Lund, G., 03.02.2015, Journal of Cardiovascular Magnetic Resonance 2015.

    Research output: SCORING: Contribution to book/anthologyConference contribution - Published abstract for conference with selection processResearchpeer-review

  15. Serial native T1- and T2-mapping to quantitatively monitor resorption of myocardial edema following acute myocardial infarction

    Tahir, E., Sinn, M., Avanesov, M., Radunski, U. K., Säring, D., Müllerleile, K., Stehning, C., Adam, G. & Lund, G., 24.02.2015, Insights Imaging.

    Research output: SCORING: Contribution to book/anthologyConference contribution - Published abstract for conference with selection processResearchpeer-review

  16. Quantitatives serielles Monitoring der Ödemresorption nach akutem Myokardinfarkt mittels nativen T1- und T2-Mapping-Techniken

    Tahir, E., Sinn, M., Säring, D., Avanesov, M., Radunski, U. K., Müllerleile, K., Adam, G. & Lund, G., 04.2015, RöFo - Fortschritte auf dem Gebiet der Röntgenstrahlen und der bildgebenden Verfahren.

    Research output: SCORING: Contribution to book/anthologyConference contribution - Published abstract for conference with selection processResearchpeer-review

  17. Reproduzierbarkeit der Größenbestimmung von Läsionen nach akutem Myokardinfarkt mittels nativen und kontrastmittelgestützten Kardio-MRT

    Tahir, E., Sinn, M., Avanesov, M., Wien, J., Säring, D., Stehning, C., Radunski, U. K., Muellerleile, K., Adam, G. & Lund, G., 2016, Fortschr Röntgenstr 2016.

    Research output: SCORING: Contribution to book/anthologyConference contribution - Published abstract for conference with selection processResearchpeer-review

  18. Reproducibility of native and contrast-enhanced CMR techniques to measure lesion size following acute myocardial infarction

    Tahir, E., Sinn, M., Avanesov, M., Wien, J., Säring, D., Radunski, U. K., Muellerleile, K., Adam, G. & Lund, G., 2016, Insights Imaging (2016) 7 (Suppl 1):S162–S465.

    Research output: SCORING: Contribution to book/anthologyConference contribution - Published abstract for conference with selection processResearchpeer-review

  19. Sensitivity of tumor motion simulation accuracy to lung biomechanical modeling approaches and parameters

    Tehrani, J. N., Yang, Y., Werner, R., Lu, W., Low, D., Guo, X. & Wang, J., 21.11.2015, In: PHYS MED BIOL. 60, 22, p. 8833-8849 17 p.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  20. DWI-FLAIR mismatch for the identification of patients with acute ischaemic stroke within 4·5 h of symptom onset (PRE-FLAIR): a multicentre observational study.

    Thomalla, G., Cheng, B., Ebinger, M., Hao, Q., Tourdias, T., Wu, O., Kim, J. S., Breuer, L., Singer, O. C., Warach, S., Christensen, S., Treszl, A., Forkert, N., Galinovic, I., Rosenkranz, M., Engelhorn, T., Köhrmann, M., Endres, M., Kang, D-W., Dousset, V., Sorensen, A. G., Liebeskind, D. S., Fiebach, J. B., Fiehler, J., Gerloff, C., STIR, U. & Investigators, VISTA. I., 2011, In: LANCET NEUROL. 10, 11, p. 978-986 11.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  21. Combining Automatic Landmark Detection and Variational Methods for Lung CT Registration

    Thomas, P., Jan, R., Jan, S., Werner, R., Heldmann, S., Handels, H. & Modersitzki, J., 26.09.2013, 5th Workshop on Pulmonary Image Analysis . Rit, S., McClelland, J. R., de Bruijne, M., Kiraly, A., Kuhnigk, J-M., Kabus, S., van Rikxoort, E. & Beichel, R. (eds.). p. 85-96 12 p.

    Research output: SCORING: Contribution to book/anthologySCORING: Contribution to collected editions/anthologiesResearchpeer-review

  22. A computerized three-dimensional atlas of the human skull and brain.

    Tiede, U., Bomans, M., Höhne, K. H., Pommert, A., Riemer, M., Schiemann, T., Schubert, R. & Lierse, W., 1993, In: AM J NEURORADIOL. 14, 3, p. 551-551 3.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  23. Revisiting 'brain modes' in a new computational era: approaches for the characterization of brain-behavioural associations

    Toba, M. N., Godefroy, O., Rushmore, R. J., Zavaglia, M., Maatoug, R., Hilgetag, C. C. & Valero-Cabré, A., 01.04.2020, In: BRAIN. 143, 4, p. 1088-1098 11 p.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  24. Game theoretical mapping of white matter contributions to visuospatial attention in stroke patients with hemineglect

    Toba, M. N., Zavaglia, M., Malherbe, C., Moreau, T., Rastelli, F., Kaglik, A., Valabrègue, R., Pradat-Diehl, P., Hilgetag, C. C. & Valero-Cabré, A., 01.08.2020, In: HUM BRAIN MAPP. 41, 11, p. 2926-2950 25 p.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  25. Reply: Inhibition between human brain areas or methodological artefact?

    Toba, M. N., Malherbe, C., Godefroy, O., Rushmore, R. J., Zavaglia, M., Maatoug, R., Mandonnet, E., Valero-Cabré, A. & Hilgetag, C. C., 05.2020, In: BRAIN. 143, 5, p. e39 e39.

    Research output: SCORING: Contribution to journalOther (editorial matter etc.)Research

  26. Advances in medical image computing.

    Tolxdorff, T., Deserno, T. M., Handels, H. & Meinzer, H-P., 2009, In: METHOD INFORM MED. 48, 4, p. 311-313 4.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  27. Characteristics of the default mode functional connectivity in normal ageing and Alzheimer's disease using resting state fMRI with a combined approach of entropy-based and graph theoretical measurements

    Toussaint, P. J., Maiz, S., Coynel, D., Doyon, J., Messé, A., de Souza, L. C., Sarazin, M., Perlbarg, V., Habert, M. O. & Benali, H., 01.11.2014, In: NEUROIMAGE. 101, p. 778-786 9 p.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  28. Modeling analysis of the relationship between EEG rhythms and connectivity among different neural populations.

    Ursino, M. & Zavaglia, M., 2007, In: J INTEGR NEUROSCI. 6, 4, p. 597-623 4.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  29. A neural network model of multisensory representation of peripersonal space: effect of tool use.

    Ursino, M., Zavaglia, M., Magosso, E., Serino, A. & Giuseppe, D. P., 2007, In: Conf Proc IEEE Eng Med Biol Soc. 2007, p. 2735-2739

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  30. Use of a neural mass model for the analysis of effective connectivity among cortical regions based on high resolution EEG recordings.

    Ursino, M., Zavaglia, M., Astolfi, L. & Babiloni, F., 2007, In: BIOL CYBERN. 96, 3, p. 351-365 3.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  31. The generation of rhythms within a cortical region: analysis of a neural mass model.

    Ursino, M., Cona, F. & Zavaglia, M., 2010, In: NEUROIMAGE. 52, 3, p. 1080-1094 3.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  32. Perturbation-driven paradoxical facilitation of visuo-spatial function: Revisiting the 'Sprague effect'

    Valero-Cabré, A., Toba, M. N., Hilgetag, C. C. & Rushmore, R. J., 01.2020, In: CORTEX. 122, p. 10-39 30 p.

    Research output: SCORING: Contribution to journalSCORING: Review articleResearch

  33. Shaping brain structure: Genetic and phylogenetic axes of macroscale organization of cortical thickness

    Valk, S. L., Xu, T., Margulies, D. S., Masouleh, S. K., Paquola, C., Goulas, A., Kochunov, P., Smallwood, J., Yeo, B. T. T., Bernhardt, B. C. & Eickhoff, S. B., 09.2020, In: SCI ADV. 6, 39

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  34. Bringing Anatomical Information into Neuronal Network Models

    van Albada, S. J., Morales-Gregorio, A., Dickscheid, T., Goulas, A., Bakker, R., Bludau, S., Palm, G., Hilgetag, C-C. & Diesmann, M., 2022, Computational Modelling of the Brain: Modelling Approaches to Cells, Circuits and Networks. Giugliano, M., Negrello, M. & Linaro, D. (eds.). 1 ed. Vol. 1359. p. 201-234 34 p. (ADV EXP MED BIOL).

    Research output: SCORING: Contribution to book/anthologySCORING: Contribution to collected editions/anthologiesResearch

  35. Bridging Cytoarchitectonics and Connectomics in Human Cerebral Cortex

    van den Heuvel, M. P., Scholtens, L. H., Feldman Barrett, L., Hilgetag, C. C. & de Reus, M. A., 14.10.2015, In: J NEUROSCI. 35, 41, p. 13943-8 6 p.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  36. Aligning 3D time-of-flight MRA datasets for quantitative longitudinal studies: evaluation of rigid registration techniques

    Verleger, T., Schönfeld, M., Säring, D., Siemonsen, S., Fiehler, J. & Forkert, N. D., 2014, In: MAGN RESON IMAGING. 32, 10, p. 1390-5 6 p.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  37. Two classes of functional connectivity in dynamical processes in networks

    Voutsa, V., Battaglia, D., Bracken, L. J., Brovelli, A., Costescu, J., Díaz Muñoz, M., Fath, B. D., Funk, A., Guirro, M., Hein, T., Kerschner, C., Kimmich, C., Lima, V., Messé, A., Parsons, A. J., Perez, J., Pöppl, R., Prell, C., Recinos, S., Shi, Y., Tiwari, S., Turnbull, L., Wainwright, J., Waxenecker, H. & Hütt, M. T., 01.10.2021, In: J R SOC INTERFACE. 18, 183, p. 20210486 20210486.

    Research output: SCORING: Contribution to journalSCORING: Review articleResearch

  38. Extending Tempcyclegan for Virtual Augmentation of Gastrointestinal Endoscopy Training Simulators

    Wallrodt, M., Schulz-Alsen, M., Ehlken, H., Rösch, T., Schmitz, R. & Werner, R., 02.06.2023, Bildverarbeitung für die Medizin 2023: Proceedings, German Workshop on Medical Image Computing, Braunschweig, July 2-4, 2023. Deserno, T. M., Handels, H., Maier, A., Maier-Hein, K., Palm, C. & Tolxdorff, T. (eds.). 1 ed. Springer Vieweg, p. 3-8 6 p. (Informatik aktuell).

    Research output: SCORING: Contribution to book/anthologySCORING: Contribution to collected editions/anthologiesResearchpeer-review

  39. Sustained activity in hierarchical modular neural networks: self-organized criticality and oscillations.

    Wang, S-J., Hilgetag, C. & Zhou, C., 2011, In: FRONT COMPUT NEUROSC. 5, p. 30

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  40. Adhesion to laminin-1 and collagen IV induces the formation of Ca2+ microdomains that sensitize mouse T cells for activation

    Weiß, M., Hernandez, L. C., Gil Montoya, D. C., Löhndorf, A., Krüger, A., Kopdag, M., Uebler, L., Landwehr, M., Nawrocki, M., Huber, S., Woelk, L-M., Werner, R., Failla, A. V., Flügel, A., Dupont, G., Guse, A. H. & Diercks, B-P., 20.06.2023, In: SCIENCE SIGNALING. 16, 790, p. eabn9405

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  41. Combining Direct 3D Volume Rendering and Magnetic Particle Imaging to Advance Radiation-Free Real-Time 3D Guidance of Vascular Interventions

    Weller, D., Salamon, J. M., Frölich, A., Möddel, M., Knopp, T. & Werner, R., 02.2020, In: CARDIOVASC INTER RAD. 43, 2, p. 322-330 9 p.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  42. Patient-specific finite element modeling of respiratory lung motion using 4D CT image data.

    Werner, R., Ehrhardt, J., Schmidt, R. & Handels, H., 2009, In: MED PHYS. 36, 5, p. 1500-1511 5.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  43. Motion artifact reducing reconstruction of 4D CT image data for the analysis of respiratory dynamics.

    Werner, R., Ehrhardt, J., Frenzel, T., Säring, D., Lu, W., Low, D. & Handels, H., 2007, In: METHOD INFORM MED. 46, 3, p. 254-260 3.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  44. Automatische Landmarkendetektion und -übertragung zur Evaluation der Registrierung von thorakalen CT-Daten

    Werner, R., Wolf, J. C., Ehrhardt, J., Schmidt-Richberg, A. & Handels, H., 2010, Bildverarbeitung für die Medizin 2010: Algorithmen - Systeme - Anwendungen (Informatik Aktuell). Springer Berlin Heidelberg, p. 31-35 5 p.

    Research output: SCORING: Contribution to book/anthologySCORING: Contribution to collected editions/anthologiesResearchpeer-review

  45. Validation and comparison of a biophysical modeling approach and non-linear registration for estimation of lung motion fields in thoracic 4D CT data (Proceedings Paper)

    Werner, R., Ehrhardt, J., Schmidt-Richberg, A. & Handels, H., 2009, Medical Imaging 2009: Image Processing (Proceedings Volume). SPIE, p. 1-8 8 p.

    Research output: SCORING: Contribution to book/anthologySCORING: Contribution to collected editions/anthologiesResearchpeer-review

  46. Virtual Spirometry: Utilizing an Abdominal Bellows System for Quantitatively Gating in 4D CT Acquisition

    Werner, R., White, B., Schwenke, M., Handels, H., Lu, W. & Low, D. A., 2009, World Congress on Medical Physics and Biomedical Engineering September 7 - 12, 2009 Munich, Germany (Ifmbe Proceedings). Springer-Verlag GmbH, p. 855-858 4 p.

    Research output: SCORING: Contribution to book/anthologySCORING: Contribution to collected editions/anthologiesResearchpeer-review

  47. Dose Accumulation based on Optimized Motion Field Estimation using Non-Linear Registration in Thoracic 4D CT Image Data

    Werner, R., Ehrhardt, J., Schmidt-Richberg, A., Bodmann, B., Cremers, F. & Handels, H., 2009, World Congress on Medical Physics and Biomedical Engineering September 7 - 12, 2009 Munich, Germany (Ifmbe Proceedings). Springer-Verlag GmbH, p. 950-953 4 p.

    Research output: SCORING: Contribution to book/anthologySCORING: Contribution to collected editions/anthologiesResearchpeer-review

  48. Estimation of motion fields by non-linear registration for local lung motion analysis in 4D CT image data

    Werner, R., Ehrhardt, J., Schmidt-Richberg, A., Heiss, A. & Handels, H., 2010, In: INT J COMPUT ASS RAD. 5, 6, p. 595-605 6.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review

  49. Estimation of Inner Lung Motion Fields by Non-linear Registration

    Werner, R., Ehrhardt, J., Schmidt-Richberg, A., Cremers, F. & Handels, H., 2009, Bildverarbeitung für die Medizin 2009. Springer Berlin Heidelberg, p. 102-106 5 p.

    Research output: SCORING: Contribution to book/anthologySCORING: Contribution to collected editions/anthologiesResearchpeer-review

  50. Technical Note: Development of a tidal volume surrogate that replaces spirometry for physiological breathing monitoring in 4D CT

    Werner, R., White, B., Handels, H., Lu, W. & Low, D. A., 2010, In: MED PHYS. 36, 2, p. 615-620 2.

    Research output: SCORING: Contribution to journalSCORING: Journal articleResearchpeer-review