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Recovery of the first full-length genome sequence of a parapoxvirus directly from a clinical sample

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Recovery of the first full-length genome sequence of a parapoxvirus directly from a clinical sample. / Günther, Thomas; Haas, Ludwig; Alawi, Malik; Wohlsein, Peter; Marks, Jerzy; Grundhoff, Adam; Becher, Paul; Fischer, Nicole.

in: SCI REP-UK, Jahrgang 7, Nr. 1, 16.06.2017, S. 3734.

Publikationen: SCORING: Beitrag in Fachzeitschrift/Zeitung › SCORING: Zeitschriftenaufsatz › Forschung › Begutachtung

Harvard

Günther, T, Haas, L, Alawi, M, Wohlsein, P, Marks, J, Grundhoff, A, Becher, P & Fischer, N 2017, 'Recovery of the first full-length genome sequence of a parapoxvirus directly from a clinical sample', SCI REP-UK, Jg. 7, Nr. 1, S. 3734. https://doi.org/10.1038/s41598-017-03997-y

APA

Günther, T., Haas, L., Alawi, M., Wohlsein, P., Marks, J., Grundhoff, A., Becher, P., & Fischer, N. (2017). Recovery of the first full-length genome sequence of a parapoxvirus directly from a clinical sample. SCI REP-UK, 7(1), 3734. https://doi.org/10.1038/s41598-017-03997-y

Vancouver

Günther T, Haas L, Alawi M, Wohlsein P, Marks J, Grundhoff A et al. Recovery of the first full-length genome sequence of a parapoxvirus directly from a clinical sample. SCI REP-UK. 2017 Jun 16;7(1):3734. https://doi.org/10.1038/s41598-017-03997-y

Bibtex

@article{ef76cd06335a40929f952efce1fc52a3,
title = "Recovery of the first full-length genome sequence of a parapoxvirus directly from a clinical sample",
abstract = "We recovered the first full-length poxvirus genome, including the terminal hairpin region, directly from complex clinical material using a combination of second generation short read and third generation nanopore sequencing technologies. The complete viral genome sequence was directly recovered from a skin lesion of a grey seal thereby preventing sequence changes due to in vitro passaging of the virus. Subsequent analysis of the proteins encoded by this virus identified genes specific for skin adaptation and pathogenesis of parapoxviruses. These data warrant the classification of seal parapoxvirus, tentatively designated SePPV, as a new species within the genus Parapoxvirus.",
keywords = "Journal Article",
author = "Thomas G{\"u}nther and Ludwig Haas and Malik Alawi and Peter Wohlsein and Jerzy Marks and Adam Grundhoff and Paul Becher and Nicole Fischer",
year = "2017",
month = jun,
day = "16",
doi = "10.1038/s41598-017-03997-y",
language = "English",
volume = "7",
pages = "3734",
journal = "SCI REP-UK",
issn = "2045-2322",
publisher = "NATURE PUBLISHING GROUP",
number = "1",

}

RIS

TY - JOUR

T1 - Recovery of the first full-length genome sequence of a parapoxvirus directly from a clinical sample

AU - Günther, Thomas

AU - Haas, Ludwig

AU - Alawi, Malik

AU - Wohlsein, Peter

AU - Marks, Jerzy

AU - Grundhoff, Adam

AU - Becher, Paul

AU - Fischer, Nicole

PY - 2017/6/16

Y1 - 2017/6/16

N2 - We recovered the first full-length poxvirus genome, including the terminal hairpin region, directly from complex clinical material using a combination of second generation short read and third generation nanopore sequencing technologies. The complete viral genome sequence was directly recovered from a skin lesion of a grey seal thereby preventing sequence changes due to in vitro passaging of the virus. Subsequent analysis of the proteins encoded by this virus identified genes specific for skin adaptation and pathogenesis of parapoxviruses. These data warrant the classification of seal parapoxvirus, tentatively designated SePPV, as a new species within the genus Parapoxvirus.

AB - We recovered the first full-length poxvirus genome, including the terminal hairpin region, directly from complex clinical material using a combination of second generation short read and third generation nanopore sequencing technologies. The complete viral genome sequence was directly recovered from a skin lesion of a grey seal thereby preventing sequence changes due to in vitro passaging of the virus. Subsequent analysis of the proteins encoded by this virus identified genes specific for skin adaptation and pathogenesis of parapoxviruses. These data warrant the classification of seal parapoxvirus, tentatively designated SePPV, as a new species within the genus Parapoxvirus.

KW - Journal Article

U2 - 10.1038/s41598-017-03997-y

DO - 10.1038/s41598-017-03997-y

M3 - SCORING: Journal article

C2 - 28623312

VL - 7

SP - 3734

JO - SCI REP-UK

JF - SCI REP-UK

SN - 2045-2322

IS - 1

ER -