State-dependent representation of stimulus-evoked activity in high-density recordings of neural cultures
Standard
State-dependent representation of stimulus-evoked activity in high-density recordings of neural cultures. / Nieus, Thierry; D'Andrea, Valeria; Amin, Hayder; Di Marco, Stefano; Safaai, Houman; Maccione, Alessandro; Berdondini, Luca; Panzeri, Stefano.
In: SCI REP-UK, Vol. 8, No. 1, 03.04.2018, p. 5578.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
Harvard
APA
Vancouver
Bibtex
}
RIS
TY - JOUR
T1 - State-dependent representation of stimulus-evoked activity in high-density recordings of neural cultures
AU - Nieus, Thierry
AU - D'Andrea, Valeria
AU - Amin, Hayder
AU - Di Marco, Stefano
AU - Safaai, Houman
AU - Maccione, Alessandro
AU - Berdondini, Luca
AU - Panzeri, Stefano
PY - 2018/4/3
Y1 - 2018/4/3
N2 - Neuronal responses to external stimuli vary from trial to trial partly because they depend on continuous spontaneous variations of the state of neural circuits, reflected in variations of ongoing activity prior to stimulus presentation. Understanding how post-stimulus responses relate to the pre-stimulus spontaneous activity is thus important to understand how state dependence affects information processing and neural coding, and how state variations can be discounted to better decode single-trial neural responses. Here we exploited high-resolution CMOS electrode arrays to record simultaneously from thousands of electrodes in in-vitro cultures stimulated at specific sites. We used information-theoretic analyses to study how ongoing activity affects the information that neuronal responses carry about the location of the stimuli. We found that responses exhibited state dependence on the time between the last spontaneous burst and the stimulus presentation and that the dependence could be described with a linear model. Importantly, we found that a small number of selected neurons carry most of the stimulus information and contribute to the state-dependent information gain. This suggests that a major value of large-scale recording is that it individuates the small subset of neurons that carry most information and that benefit the most from knowledge of its state dependence.
AB - Neuronal responses to external stimuli vary from trial to trial partly because they depend on continuous spontaneous variations of the state of neural circuits, reflected in variations of ongoing activity prior to stimulus presentation. Understanding how post-stimulus responses relate to the pre-stimulus spontaneous activity is thus important to understand how state dependence affects information processing and neural coding, and how state variations can be discounted to better decode single-trial neural responses. Here we exploited high-resolution CMOS electrode arrays to record simultaneously from thousands of electrodes in in-vitro cultures stimulated at specific sites. We used information-theoretic analyses to study how ongoing activity affects the information that neuronal responses carry about the location of the stimuli. We found that responses exhibited state dependence on the time between the last spontaneous burst and the stimulus presentation and that the dependence could be described with a linear model. Importantly, we found that a small number of selected neurons carry most of the stimulus information and contribute to the state-dependent information gain. This suggests that a major value of large-scale recording is that it individuates the small subset of neurons that carry most information and that benefit the most from knowledge of its state dependence.
KW - Animals
KW - Cells, Cultured
KW - Electric Stimulation
KW - Electrodes
KW - Electrophysiology/instrumentation
KW - Hippocampus/cytology
KW - Linear Models
KW - Metals/chemistry
KW - Neurons/cytology
KW - Norepinephrine/metabolism
KW - Oxides
KW - Rats
KW - Semiconductors
U2 - 10.1038/s41598-018-23853-x
DO - 10.1038/s41598-018-23853-x
M3 - SCORING: Journal article
C2 - 29615719
VL - 8
SP - 5578
JO - SCI REP-UK
JF - SCI REP-UK
SN - 2045-2322
IS - 1
ER -