Large multiethnic Candidate Gene Study for C-reactive protein levels: identification of a novel association at CD36 in African Americans

  • Jaclyn Ellis
  • Ethan M Lange
  • Jin Li
  • Josee Dupuis
  • Jens Baumert
  • Jeremy D Walston
  • Brendan J Keating
  • Peter Durda
  • Ervin R Fox
  • Cameron D Palmer
  • Yan A Meng
  • Taylor Young
  • Deborah N Farlow
  • Renate B Schnabel
  • Carola S Marzi
  • Emma Larkin
  • Lisa W Martin
  • Joshua C Bis
  • Paul Auer
  • Vasan S Ramachandran
  • Stacey B Gabriel
  • Monte S Willis
  • James S Pankow
  • George J Papanicolaou
  • Jerome I Rotter
  • Christie M Ballantyne
  • Myron D Gross
  • Guillaume Lettre
  • James G Wilson
  • Ulrike Peters
  • Wolfgang Koenig
  • Russell P Tracy
  • Susan Redline
  • Alex P Reiner
  • Emelia J Benjamin
  • Leslie A Lange

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Abstract

C-reactive protein (CRP) is a heritable biomarker of systemic inflammation and a predictor of cardiovascular disease (CVD). Large-scale genetic association studies for CRP have largely focused on individuals of European descent. We sought to uncover novel genetic variants for CRP in a multiethnic sample using the ITMAT Broad-CARe (IBC) array, a custom 50,000 SNP gene-centric array having dense coverage of over 2,000 candidate CVD genes. We performed analyses on 7,570 African Americans (AA) from the Candidate gene Association Resource (CARe) study and race-combined meta-analyses that included 29,939 additional individuals of European descent from CARe, the Women's Health Initiative (WHI) and KORA studies. We observed array-wide significance (p < 2.2 × 10(-6)) for four loci in AA, three of which have been reported previously in individuals of European descent (IL6R, p = 2.0 × 10(-6); CRP, p = 4.2 × 10(-71); APOE, p = 1.6 × 10(-6)). The fourth significant locus, CD36 (p = 1.6 × 10(-6)), was observed at a functional variant (rs3211938) that is extremely rare in individuals of European descent. We replicated the CD36 finding (p = 1.8 × 10(-5)) in an independent sample of 8,041 AA women from WHI; a meta-analysis combining the CARe and WHI AA results at rs3211938 reached genome-wide significance (p = 1.5 × 10(-10)). In the race-combined meta-analyses, 13 loci reached significance, including ten (CRP, TOMM40/APOE/APOC1, HNF1A, LEPR, GCKR, IL6R, IL1RN, NLRP3, HNF4A and BAZ1B/BCL7B) previously associated with CRP, and one (ARNTL) previously reported to be nominally associated with CRP. Two novel loci were also detected (RPS6KB1, p = 2.0 × 10(-6); CD36, p = 1.4 × 10(-6)). These results highlight both shared and unique genetic risk factors for CRP in AA compared to populations of European descent.

Bibliographical data

Original languageEnglish
ISSN0340-6717
DOIs
Publication statusPublished - 08.2014
PubMed 24643644