Critical evaluation of the DNA-methylation markers ABCG1 and SREBF1 for Type 2 diabetes stratification

  • Christin Krause
  • Helen Sievert
  • Cathleen Geißler
  • Martina Grohs
  • Alexander T El Gammal
  • Stefan Wolter
  • Olena Ohlei
  • Fabian Kilpert
  • Ulrike M Krämer
  • Meike Kasten
  • Christine Klein
  • Georg E Brabant
  • Oliver Mann
  • Hendrik Lehnert
  • Henriette Kirchner

Abstract

Aim: Validation of epigenome-wide association studies is sparse. Therefore, we evaluated the methylation markers cg06500161 (ABCG1) and cg11024682 (SREBF1) as classifiers for diabetes stratification. Patients & methods: DNA methylation was measured in blood (n = 167), liver (n = 99) and visceral adipose tissue (n = 99) of nondiabetic or Type 2 diabetic subjects by bisulfite pyrosequencing. Results: DNA methylation at cg11024682 in blood and liver correlated with BMI. Methylation at cg06500161 was influenced by the adjacent SNP rs9982016. Insulin-resistant and sensitive subjects could be stratified by DNA methylation status in blood or visceral adipose tissue. Conclusion: DNA methylation at both loci in blood presents a promising approach for risk group stratification and could be valuable for personalized Type 2 diabetes risk prediction in the future.

Bibliographical data

Original languageEnglish
ISSN1750-1911
DOIs
Publication statusPublished - 06.06.2019
PubMed 31169416