BRF1 mutations alter RNA polymerase III-dependent transcription and cause neurodevelopmental anomalies
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BRF1 mutations alter RNA polymerase III-dependent transcription and cause neurodevelopmental anomalies. / Borck, Guntram; Hög, Friederike; Dentici, Maria Lisa; Tan, Perciliz L; Sowada, Nadine; Medeira, Ana; Gueneau, Lucie; Thiele, Holger; Kousi, Maria; Lepri, Francesca; Wenzeck, Larissa; Blumenthal, Ian; Radicioni, Antonio; Schwarzenberg, Tito Livio; Mandriani, Barbara; Fischetto, Rita; Morris-Rosendahl, Deborah J; Altmüller, Janine; Reymond, Alexandre; Nürnberg, Peter; Merla, Giuseppe; Dallapiccola, Bruno; Katsanis, Nicholas; Cramer, Patrick; Kubisch, Christian.
In: GENOME RES, Vol. 25, No. 2, 02.2015, p. 155-66.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
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TY - JOUR
T1 - BRF1 mutations alter RNA polymerase III-dependent transcription and cause neurodevelopmental anomalies
AU - Borck, Guntram
AU - Hög, Friederike
AU - Dentici, Maria Lisa
AU - Tan, Perciliz L
AU - Sowada, Nadine
AU - Medeira, Ana
AU - Gueneau, Lucie
AU - Thiele, Holger
AU - Kousi, Maria
AU - Lepri, Francesca
AU - Wenzeck, Larissa
AU - Blumenthal, Ian
AU - Radicioni, Antonio
AU - Schwarzenberg, Tito Livio
AU - Mandriani, Barbara
AU - Fischetto, Rita
AU - Morris-Rosendahl, Deborah J
AU - Altmüller, Janine
AU - Reymond, Alexandre
AU - Nürnberg, Peter
AU - Merla, Giuseppe
AU - Dallapiccola, Bruno
AU - Katsanis, Nicholas
AU - Cramer, Patrick
AU - Kubisch, Christian
N1 - © 2015 Borck et al.; Published by Cold Spring Harbor Laboratory Press.
PY - 2015/2
Y1 - 2015/2
N2 - RNA polymerase III (Pol III) synthesizes tRNAs and other small noncoding RNAs to regulate protein synthesis. Dysregulation of Pol III transcription has been linked to cancer, and germline mutations in genes encoding Pol III subunits or tRNA processing factors cause neurogenetic disorders in humans, such as hypomyelinating leukodystrophies and pontocerebellar hypoplasia. Here we describe an autosomal recessive disorder characterized by cerebellar hypoplasia and intellectual disability, as well as facial dysmorphic features, short stature, microcephaly, and dental anomalies. Whole-exome sequencing revealed biallelic missense alterations of BRF1 in three families. In support of the pathogenic potential of the discovered alleles, suppression or CRISPR-mediated deletion of brf1 in zebrafish embryos recapitulated key neurodevelopmental phenotypes; in vivo complementation showed all four candidate mutations to be pathogenic in an apparent isoform-specific context. BRF1 associates with BDP1 and TBP to form the transcription factor IIIB (TFIIIB), which recruits Pol III to target genes. We show that disease-causing mutations reduce Brf1 occupancy at tRNA target genes in Saccharomyces cerevisiae and impair cell growth. Moreover, BRF1 mutations reduce Pol III-related transcription activity in vitro. Taken together, our data show that BRF1 mutations that reduce protein activity cause neurodevelopmental anomalies, suggesting that BRF1-mediated Pol III transcription is required for normal cerebellar and cognitive development.
AB - RNA polymerase III (Pol III) synthesizes tRNAs and other small noncoding RNAs to regulate protein synthesis. Dysregulation of Pol III transcription has been linked to cancer, and germline mutations in genes encoding Pol III subunits or tRNA processing factors cause neurogenetic disorders in humans, such as hypomyelinating leukodystrophies and pontocerebellar hypoplasia. Here we describe an autosomal recessive disorder characterized by cerebellar hypoplasia and intellectual disability, as well as facial dysmorphic features, short stature, microcephaly, and dental anomalies. Whole-exome sequencing revealed biallelic missense alterations of BRF1 in three families. In support of the pathogenic potential of the discovered alleles, suppression or CRISPR-mediated deletion of brf1 in zebrafish embryos recapitulated key neurodevelopmental phenotypes; in vivo complementation showed all four candidate mutations to be pathogenic in an apparent isoform-specific context. BRF1 associates with BDP1 and TBP to form the transcription factor IIIB (TFIIIB), which recruits Pol III to target genes. We show that disease-causing mutations reduce Brf1 occupancy at tRNA target genes in Saccharomyces cerevisiae and impair cell growth. Moreover, BRF1 mutations reduce Pol III-related transcription activity in vitro. Taken together, our data show that BRF1 mutations that reduce protein activity cause neurodevelopmental anomalies, suggesting that BRF1-mediated Pol III transcription is required for normal cerebellar and cognitive development.
KW - Abnormalities, Multiple
KW - Adolescent
KW - Amino Acid Sequence
KW - Amino Acid Substitution
KW - Animals
KW - Brain
KW - Cell Proliferation
KW - Child
KW - Child, Preschool
KW - Exome
KW - Facies
KW - Female
KW - High-Throughput Nucleotide Sequencing
KW - Humans
KW - Infant
KW - Intellectual Disability
KW - Magnetic Resonance Imaging
KW - Male
KW - Models, Molecular
KW - Molecular Sequence Data
KW - Mutation
KW - Pedigree
KW - Phenotype
KW - Protein Conformation
KW - Protein Isoforms
KW - RNA Polymerase III
KW - Siblings
KW - Syndrome
KW - TATA-Binding Protein Associated Factors
KW - Transcription, Genetic
KW - Zebrafish
U2 - 10.1101/gr.176925.114
DO - 10.1101/gr.176925.114
M3 - SCORING: Journal article
C2 - 25561519
VL - 25
SP - 155
EP - 166
JO - GENOME RES
JF - GENOME RES
SN - 1088-9051
IS - 2
ER -