Institute of Computational Neuroscience
Publications
3D cerebrovascular segmentation combining fuzzy vessel enhancement and level-sets with anisotropic energy weights
Forkert, N. D., Schmidt-Richberg, A., Fiehler, J., Illies, T., Möller, D., Säring, D., Handels, H. & Ehrhardt, J., 01.02.2013, In: MAGN RESON IMAGING. 31, 2, p. 262-71 10 p.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
[3-dimensional display of computed tomographic studies of craniofacial anomalies]
Witte, G., Höltje, W., Tiede, U. & Riemer, M., 1986, In: ROFO-FORTSCHR RONTG. 144, 4, p. 400-405 4.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
3-D segmentation of MR images of the head for 3-D display.
Bomans, M., Hohne, K. H., Tiede, U. & Riemer, M., 1990, In: IEEE T MED IMAGING. 9, 2, p. 177-183 2.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
3D Segmentation of the Left Ventricle Combining Long- and Short-axis MR Images.
Säring, D., Relan, J., Groth, M., Müllerleile, K. & Handels, H., 2009, In: METHOD INFORM MED. 48, 4, 4.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
3d-SMRnet: Achieving a New Quality of MPI System Matrix Recovery by Deep Learning
Baltruschat, I. M., Szwargulski, P. K., Griese, F., Grosser, M., Werner, R. & Knopp, T., 10.2020, Medical Image Computing and Computer Assisted Intervention – MICCAI 2020: 23rd International Conference, Lima, Peru, October 4–8, 2020, Proceedings, Part II. 1 ed. Springer Nature Switzerland, p. 74-82 9 p. (Lecture Notes in Computer Science (LNCS); no. 12262).Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review
[3-D visualization of dose distributions in CT image volumes]
Tabbert, E., Riemer, M., Schiemann, T., Tiede, U. & Höhne, K. H., 1992, In: STRAHLENTHER ONKOL. 168, 1, p. 31-34 1.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
4D blood flow visualization fusing 3D and 4D MRA image sequences.
Forkert, N., Fiehler, J., Illies, T., Möller, D. P. F., Handels, H. & Säring, D., 2012, In: J MAGN RESON IMAGING. 36, 2, p. 443-453 2.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
4D CT image artifacts affect local control in SBRT of lung and liver metastases
Sentker, T., Schmidt, V., Ozga, A-K., Petersen, C., Madesta, F., Hofmann, C., Werner, R. & Gauer, T., 07.2020, In: RADIOTHER ONCOL. 148, p. 229-234 6 p.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
4D dose simulation in volumetric arc therapy: Accuracy and affecting parameters
Sothmann, T., Gauer, T. & Werner, R., 2017, In: PLOS ONE. 12, 2, p. e0172810 17 p.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
4D medical image computing and visualization of lung tumor mobility in spatio-temporal CT image data.
Handels, H., Werner, R., Schmidt, R., Frenzel, T., Lu, W., Low, D. & Ehrhardt, J., 2007, In: INT J MED INFORM. 76, 3, p. 433-439 3.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
4D Motion Modeling: Estimation of Respiratory Motion for Radiation Therapy
Ehrhardt, J., Schmidt-Richberg, A., Werner, R. & Handels, H., 2009, World Congress on Medical Physics and Biomedical Engineering September 7 - 12, 2009 Munich, Germany (Ifmbe Proceedings). Springer-Verlag GmbH, p. 2166-2169 4 p.Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review
A Bayesian Alternative to Mutual Information for the Hierarchical Clustering of Dependent Random Variables
Marrelec, G., Messé, A. & Bellec, P., 2015, In: PLOS ONE. 10, 9, p. e0137278Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
Ability of extracellular volume imaging to serially measure infarct size compared to LGE within six months after acute myocardial infarction
Sinn, M., Tahir, E., Radunski, U. K., Säring, D., Müllerleile, K., Stehning, C., Adam, G. & Lund, G., 03.02.2015, Journal of Cardiovascular Magnetic Resonance .Research output: SCORING: Contribution to book/anthology › Conference contribution - Published abstract for conference with selection process › Research › peer-review
A blueprint of mammalian cortical connectomes
Goulas, A., Majka, P., Rosa, M. G. P. & Hilgetag, C. C., 03.2019, In: PLOS BIOL. 17, 3, p. e2005346Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
A closer look at the apparent correlation of structural and functional connectivity in excitable neural networks
Messé, A., Hütt, M-T., König, P. & Hilgetag, C. C., 19.01.2015, In: SCI REP-UK. 5, p. Art. 7870Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
A computerized three-dimensional atlas of the human skull and brain.
Tiede, U., Bomans, M., Höhne, K. H., Pommert, A., Riemer, M., Schiemann, T., Schubert, R. & Lierse, W., 1993, In: AM J NEURORADIOL. 14, 3, p. 551-551 3.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
A Connectomic Hypothesis for the Hominization of the Brain
Changeux, J-P., Goulas, A. & Hilgetag, C. C., 31.03.2021, In: CEREB CORTEX. 31, 5, p. 2425-2449 25 p.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
Adhesion to laminin-1 and collagen IV induces the formation of Ca2+ microdomains that sensitize mouse T cells for activation
Weiß, M., Hernandez, L. C., Gil Montoya, D. C., Löhndorf, A., Krüger, A., Kopdag, M., Uebler, L., Landwehr, M., Nawrocki, M., Huber, S., Woelk, L-M., Werner, R., Failla, A. V., Flügel, A., Dupont, G., Guse, A. H. & Diercks, B-P., 20.06.2023, In: SCIENCE SIGNALING. 16, 790, p. eabn9405Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
Advances in medical image computing.
Handels, H., Horsch, A. & Meinzer, H-P., 2007, In: METHOD INFORM MED. 46, 3, p. 251-253 3.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
Advances in medical image computing.
Tolxdorff, T., Deserno, T. M., Handels, H. & Meinzer, H-P., 2009, In: METHOD INFORM MED. 48, 4, p. 311-313 4.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
A dynamical pattern recognition model of gamma activity in auditory cortex.
Zavaglia, M., Canolty, R. T., Schofield, T. M., Leff, A. P., Ursino, M., Knight, R. T. & Penny, W. D., 2012, In: NEURAL NETWORKS. 28, p. 1-14Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
A Flexible Variational Registration Framework
Schmidt-Richberg, A., Werner, R., Handels, H. & Ehrhardt, J., 09.05.2014, In: Insight Journal. 12 p.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research
A framework for representation and visualization of 3D shape variability of organs in an interactive anatomical atlas.
Handels, H. & Hacker, S., 2009, In: METHOD INFORM MED. 48, 3, p. 272-281 3.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
A Framework for Visuo-Haptic Simulation of Puncture Interventions
Färber, M., Dalek, D., Habermann, C., Hummel, F., Schöps, C. & Handels, H., 2009, Proceedings 154 - Informatik 2009 Im Focus Leben: Jahrestagung Lübeck. Köllen Verlag Bonn, p. 1309-1316 8 p.Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review
Aligning 3D time-of-flight MRA datasets for quantitative longitudinal studies: evaluation of rigid registration techniques
Verleger, T., Schönfeld, M., Säring, D., Siemonsen, S., Fiehler, J. & Forkert, N. D., 2014, In: MAGN RESON IMAGING. 32, 10, p. 1390-5 6 p.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
Altered topology of large-scale structural brain networks in chronic stroke
Cheng, B., Schlemm, E., Schulz, R., Bönstrup, M., Messe, A., Hilgetag, C-C., Gerloff, C. & Thomalla, G., 04.10.2019, In: BRAIN COMMUN. 2019, 1, p. 1-13Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
Altered topology of structural brain networks in patients with Gilles de la Tourette syndrome
Schlemm, E., Cheng, B., Fischer, F., Hilgetag, C., Gerloff, C. & Thomalla, G., 06.09.2017, In: SCI REP-UK. 7, 1, p. 10606Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
A Modular Framework for Post-Processing and Analysis of Fluorescence Microscopy Image Sequences of Subcellular Calcium Dynamics
Schetelig, D., Wolf, I., Diercks, B-P., Fliegert, R., Guse, A., Schlaefer, A. & Werner, R., 2015, Bildverarbeitung für die Medizin 2015. Handels, H., Deserno, T. M., Meinzer, H-P. & Tolxdorff, T. (eds.). 1 ed. Berlin Heidelberg: Springer, p. 401-406 6 p. (Informatik Aktuell).Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review
Analyse und dynamische 3D-Visualisierung des Blutflusses von zerebralen Gefäßstrukturen unter Verwendung von 3D- und 4D-Magnetresonanzangiographie-Bildfolgen
Forkert, N., 2009, Informatiktage 2009 Lecture Notes in Informatics (LNI) - Seminars. Köllen Verlag Bonn, p. 223-226 4 p.Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review
Analysis and dynamic 3D visualization of cerebral blood flow combining 3D and 4D MR image sequences (Proceedings Paper)
Forkert, N., Säring, D., Fiehler, J., Illies, T., Dietmar, M. & Handels, H., 2009, Medical Imaging 2009: Visualization, Image-Guided Procedures, and Modeling (Proceedings Volume). SPIE, p. 331-338 8 p.Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review
Analysis of Dose Shifts induced by Organ Movements during Treatment with TomoTherapy using a Motion Phantom and GafChromic EBT Films
Grohmann, C., Werner, R., Dirk, A. & Cremers, F., 2009, World Congress on Medical Physics and Biomedical Engineering September 7 - 12, 2009 Munich, Germany (Ifmbe Proceedings). Springer-Verlag GmbH, p. 1020-1023 4 p.Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review
Analysis of the influence of 4D MR angiography temporal resolution on time-to-peak estimation error for different cerebral vessel structures.
Forkert, N., Illies, T., Möller, D., Handels, H., Säring, D. & Fiehler, J., 2012, In: AM J NEURORADIOL. 33, 11, p. 2103-2109 11.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
Analysis of the influence of imaging-related uncertainties on cerebral aneurysm deformation quantification using a no-deformation physical flow phantom
Schetelig, D., Sedlacik, J., Fiehler, J., Frölich, A., Knopp, T., Sothmann, T., Waschkewitz, J. & Werner, R., 20.07.2018, In: SCI REP-UK. 8, 1, p. 11004 9 p., 11004.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
An anatomical atlas to support the virtual planning of hip operations.
Ehrhardt, J., Handels, H., Wegner, T., Strathmann, B., Plötz, W. & Pöppl, S. J., 2000, In: Stud Health Technol Inform. 77, p. 1226-1230Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
An architectonic type principle integrates macroscopic cortico-cortical connections with intrinsic cortical circuits of the primate brain
Hilgetag, C. C., Beul, S. F., van Albada, S. J. & Goulas, A., 2019, In: NETW NEUROSCI. 3, 4, p. 905-923 19 p.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
An architectonic type principle in the development of laminar patterns of cortico-cortical connections
Beul, S. F., Goulas, A. & Hilgetag, C. C., 05.2021, In: BRAIN STRUCT FUNCT. 226, 4, p. 979-987 9 p.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
Anatomical connectivity defines the organization of clusters of cortical areas in the macaque monkey and the cat
Hilgetag, C. C., Burns, G. A., O'Neill, M. A., Scannell, J. W. & Young, M. P., 29.01.2000, In: PHILOS T R SOC B. 355, 1393, p. 91-110 20 p.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
A natural cortical axis connecting the outside and inside of the human brain
Hilgetag, C-C., Goulas, A. & Changeux, J-P., 02.08.2022, In: NETW NEUROSCI. 6, 4, p. 950–959 10 p.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
A neural mass model for the simulation of cortical activity estimated from high resolution EEG during cognitive or motor tasks.
Zavaglia, M., Astolfi, L., Babiloni, F. & Ursino, M., 2006, In: J NEUROSCI METH. 157, 2, p. 317-329 2.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
A neural mass model of interconnected regions simulates rhythm propagation observed via TMS-EEG.
Cona, F., Zavaglia, M., Massimini, M., Rosanova, M. & Ursino, M., 2011, In: NEUROIMAGE. 57, 3, p. 1045-1058 3.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
A neural network model of multisensory representation of peripersonal space: effect of tool use.
Ursino, M., Zavaglia, M., Magosso, E., Serino, A. & Giuseppe, D. P., 2007, In: Conf Proc IEEE Eng Med Biol Soc. 2007, p. 2735-2739Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
A new cerebral vessel benchmark dataset (CAPUT) for validation of image-based aneurysm deformation estimation algorithms
Schetelig, D., Frölich, A., Knopp, T. & Werner, R., 30.10.2018, In: SCI REP-UK. 8, 1, p. 15999 8 p.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
A new method for practicing exploration, dissection, and simulation with a complete computerized three-dimensional model of the brain and skull.
Schubert, R., Höhne, K. H., Pommert, A., Riemer, M., Schiemann, T., Tiede, U. & Lierse, W., 1994, In: Acta Anat (Basel). 150, 1, p. 69-74 1.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
A new method for representing the human anatomy.
Schubert, R., Bomans, M., Höhne, K. H., Pommert, A., Riemer, M., Schiemann, T., Tiede, U. & Lierse, W., 1993, In: COMPUT MED IMAG GRAP. 17, 4-5, p. 243-249 4-5.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
A new representation of knowledge concerning human anatomy and function.
Höhne, K. H., Pflesser, B., Pommert, A., Riemer, M., Schiemann, T., Schubert, R. & Tiede, U., 1995, In: NAT MED. 1, 6, p. 506-511 6.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
An optical flow based method for improved reconstruction of 4D CT data sets acquired during free breathing.
Ehrhardt, J., Werner, R., Säring, D., Frenzel, T., Lu, W., Low, D. & Handels, H., 2007, In: MED PHYS. 34, 2, p. 711-721 2.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
A novel interactive anatomic atlas of the hand.
Gehrmann, S., Höhne, K. H., Linhart, W., Pflesser, B., Pommert, A., Riemer, M., Tiede, U., Windolf, J., Schumacher, U. & Rueger, J. M., 2006, In: CLIN ANAT. 19, 3, p. 258-266 3.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review
A Novel network classifier and its application: Optimal hierarchical orderings of the cat visual system from anatomical data
Hilgetag, C-C., O'Neill, M. A., Scannell, J. W. & Young, M. P., 1995, Genetic Algorithms in Engineering Systems: Innovations and Applications: IEEE Publication # 414. IEEE, p. 71-75Research output: SCORING: Contribution to book/anthology › Conference contribution - Article for conference › Research › peer-review
AnToNIa: A Software Tool for the Hemodynamic Analysis of Cerebral Vascular Malformations Using 3D and 4D MRA Image Sequences
Forkert, N., Säring, D., Fiehler, J., Illies, T., Möller, D. & Handels, H., 2009, Proceedings 154 - Informatik 2009 Im Focus Leben (Jahrestagung Lübeck). Köllen Verlag Bonn, p. 1309-1316 8 p.Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review
[Applicability of digital methods in x-ray diagnosis]
Witte, G., Höhne, K. H., Böcker, F., Riemer, M. & Bücheler, E., 1985, In: ROFO-FORTSCHR RONTG. 142, 6, p. 600-610 6.Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review