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BIOINFORMATICS

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Publications

  1. 2023

  2. Inference of differential key regulatory networks and mechanistic drug repurposing candidates from scRNA-seq data with SCANet

    Oubounyt, M., Adlung, L., Patroni, F., Wenke, N. K., Maier, A., Hartung, M., Baumbach, J. & Elkjaer, M. L., 01.11.2023, In: BIOINFORMATICS. 39, 11, btad644.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  3. 2021

  4. Interactive gene networks with KNIT

    Magruder, D. S., Liebhoff, A. M., Bethune, J. & Bonn, S., 19.04.2021, In: BIOINFORMATICS. 37, 2, p. 276-278 3 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  5. 2020

  6. genBaRcode - a comprehensive R package for genetic barcode analysis

    Thielecke, L., Cornils, K. & Glauche, I., 01.04.2020, In: BIOINFORMATICS. 36, 7, p. 2189-2194 6 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  7. 2015

  8. Data2Dynamics: a modeling environment tailored to parameter estimation in dynamical systems

    Raue, A., Steiert, B., Schelker, M., Kreutz, C., Maiwald, T., Hass, H., Vanlier, J., Tönsing, C., Adlung, L., Engesser, R., Mader, W., Heinemann, T., Hasenauer, J., Schilling, M., Höfer, T., Klipp, E., Theis, F., Klingmüller, U., Schöberl, B. & Timmer, J., 01.11.2015, In: BIOINFORMATICS. 31, 21, p. 3558-60 3 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  9. Semiconductor sequencing: how many flows do you need?

    Budczies, J., Bockmayr, M., Treue, D., Klauschen, F. & Denkert, C., 15.04.2015, In: BIOINFORMATICS. 31, 8, p. 1199-203 5 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  10. 2013

  11. An alignment-free test for recombination

    Haubold, B., Krause, L., Horn, T. & Pfaffelhuber, P., 15.12.2013, In: BIOINFORMATICS. 29, 24, p. 3121-7 7 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  12. 2012

  13. An unbiased evaluation of gene prioritization tools

    Börnigen, D., Tranchevent, L-C., Bonachela-Capdevila, F., Devriendt, K., De Moor, B., De Causmaecker, P. & Moreau, Y., 01.12.2012, In: BIOINFORMATICS. 28, 23, p. 3081-3088 8 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  14. 2008

  15. qpcR: an R package for sigmoidal model selection in quantitative real-time polymerase chain reaction analysis.

    Ritz, C. & Spiess, A-N., 2008, In: BIOINFORMATICS. 24, 13, p. 1549-1551 13.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  16. 2007

  17. DASS: efficient discovery and p-value calculation of substructures in unordered data.

    Hollunder, J., Friedel, M., Beyer, A., Workman, C. T. & Wilhelm, T., 2007, In: BIOINFORMATICS. 23, 1, p. 77-83 1.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  18. Simulating psoriasis by altering transit amplifying cells.

    Grabe, N. & Neuber, K., 2007, In: BIOINFORMATICS. 23, 11, p. 1309-1312 11.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review