Open-access quantitative MRI data of the spinal cord and reproducibility across participants, sites and manufacturers

  • Julien Cohen-Adad
  • Eva Alonso-Ortiz
  • Mihael Abramovic
  • Carina Arneitz
  • Nicole Atcheson
  • Laura Barlow
  • Robert L Barry
  • Markus Barth
  • Marco Battiston
  • Christian Büchel
  • Matthew Budde
  • Virginie Callot
  • Anna J E Combes
  • Benjamin De Leener
  • Maxime Descoteaux
  • Paulo Loureiro de Sousa
  • Marek Dostál
  • Julien Doyon
  • Adam Dvorak
  • Falk Eippert
  • Karla R Epperson
  • Kevin S Epperson
  • Patrick Freund
  • Jürgen Finsterbusch
  • Alexandru Foias
  • Michela Fratini
  • Issei Fukunaga
  • Claudia A M Gandini Wheeler-Kingshott
  • Giancarlo Germani
  • Guillaume Gilbert
  • Federico Giove
  • Charley Gros
  • Francesco Grussu
  • Akifumi Hagiwara
  • Pierre-Gilles Henry
  • Tomáš Horák
  • Masaaki Hori
  • James Joers
  • Kouhei Kamiya
  • Haleh Karbasforoushan
  • Miloš Keřkovský
  • Ali Khatibi
  • Joo-Won Kim
  • Nawal Kinany
  • Hagen H Kitzler
  • Shannon Kolind
  • Yazhuo Kong
  • Petr Kudlička
  • Paul Kuntke
  • Nyoman D Kurniawan
  • Slawomir Kusmia
  • René Labounek
  • Maria Marcella Laganà
  • Cornelia Laule
  • Christine S Law
  • Christophe Lenglet
  • Tobias Leutritz
  • Yaou Liu
  • Sara Llufriu
  • Sean Mackey
  • Eloy Martinez-Heras
  • Loan Mattera
  • Igor Nestrasil
  • Kristin P O'Grady
  • Nico Papinutto
  • Daniel Papp
  • Deborah Pareto
  • Todd B Parrish
  • Anna Pichiecchio
  • Ferran Prados
  • Àlex Rovira
  • Marc J Ruitenberg
  • Rebecca S Samson
  • Giovanni Savini
  • Maryam Seif
  • Alan C Seifert
  • Alex K Smith
  • Seth A Smith
  • Zachary A Smith
  • Elisabeth Solana
  • Y Suzuki
  • George Tackley
  • Alexandra Tinnermann
  • Jan Valošek
  • Dimitri Van De Ville
  • Marios C Yiannakas
  • Kenneth A Weber Ii
  • Nikolaus Weiskopf
  • Richard G Wise
  • Patrik O Wyss
  • Junqian Xu

Abstract

In a companion paper by Cohen-Adad et al. we introduce the spine generic quantitative MRI protocol that provides valuable metrics for assessing spinal cord macrostructural and microstructural integrity. This protocol was used to acquire a single subject dataset across 19 centers and a multi-subject dataset across 42 centers (for a total of 260 participants), spanning the three main MRI manufacturers: GE, Philips and Siemens. Both datasets are publicly available via git-annex. Data were analysed using the Spinal Cord Toolbox to produce normative values as well as inter/intra-site and inter/intra-manufacturer statistics. Reproducibility for the spine generic protocol was high across sites and manufacturers, with an average inter-site coefficient of variation of less than 5% for all the metrics. Full documentation and results can be found at https://spine-generic.rtfd.io/ . The datasets and analysis pipeline will help pave the way towards accessible and reproducible quantitative MRI in the spinal cord.

Bibliografische Daten

OriginalspracheEnglisch
Aufsatznummer219
ISSN2052-4463
DOIs
StatusVeröffentlicht - 16.08.2021

Anmerkungen des Dekanats

© 2021. The Author(s).

PubMed 34400655