Genomic analyses identify hundreds of variants associated with age at menarche and support a role for puberty timing in cancer risk
Standard
Genomic analyses identify hundreds of variants associated with age at menarche and support a role for puberty timing in cancer risk. / Day, Felix R; Thompson, Deborah J; Helgason, Hannes; Chasman, Daniel I; Finucane, Hilary; Sulem, Patrick; Ruth, Katherine S; Whalen, Sean; Sarkar, Abhishek K; Albrecht, Eva; Altmaier, Elisabeth; Amini, Marzyeh; Barbieri, Caterina M; Boutin, Thibaud; Campbell, Archie; Demerath, Ellen; Giri, Ayush; He, Chunyan; Hottenga, Jouke J; Karlsson, Robert; Kolcic, Ivana; Loh, Po-Ru; Lunetta, Kathryn L; Mangino, Massimo; Marco, Brumat; McMahon, George; Medland, Sarah E; Nolte, Ilja M; Noordam, Raymond; Nutile, Teresa; Paternoster, Lavinia; Perjakova, Natalia; Porcu, Eleonora; Rose, Lynda M; Schraut, Katharina E; Segrè, Ayellet V; Smith, Albert V; Stolk, Lisette; Teumer, Alexander; Andrulis, Irene L; Bandinelli, Stefania; Beckmann, Matthias W; Benitez, Javier; Bergmann, Sven; Bochud, Murielle; Boerwinkle, Eric; Bojesen, Stig E; Bolla, Manjeet K; Brand, Judith S; Brauch, Hiltrud; Brenner, Hermann; Broer, Linda; Brüning, Thomas; Buring, Julie E; Campbell, Harry; Catamo, Eulalia; Chanock, Stephen; Chenevix-Trench, Georgia; Corre, Tanguy; Couch, Fergus J; Cousminer, Diana L; Cox, Angela; Crisponi, Laura; Czene, Kamila; Davey Smith, George; de Geus, Eco J C N; de Mutsert, Renée; De Vivo, Immaculata; Dennis, Joe; Devilee, Peter; Dos-Santos-Silva, Isabel; Dunning, Alison M; Eriksson, Johan G; Fasching, Peter A; Fernández-Rhodes, Lindsay; Ferrucci, Luigi; Flesch-Janys, Dieter; Franke, Lude; Gabrielson, Marike; Gandin, Ilaria; Giles, Graham G; Grallert, Harald; Gudbjartsson, Daniel F; Guénel, Pascal; Hall, Per; Hallberg, Emily; Hamann, Ute; Harris, Tamara B; Hartman, Catharina A; Heiss, Gerardo; Hooning, Maartje J; Hopper, John L; Hu, Frank; Hunter, David J; Ikram, M Arfan; Im, Hae Kyung; Järvelin, Marjo-Riitta; Joshi, Peter K; Karasik, David; Kellis, Manolis; Kutalik, Zoltan; LaChance, Genevieve; Lambrechts, Diether; Langenberg, Claudia; Launer, Lenore J; Laven, Joop S E; Lenarduzzi, Stefania; Li, Jingmei; Lind, Penelope A; Lindstrom, Sara; Liu, YongMei; Luan, Jian'an; Mägi, Reedik; Mannermaa, Arto; Mbarek, Hamdi; McCarthy, Mark I; Meisinger, Christa; Meitinger, Thomas; Menni, Cristina; Metspalu, Andres; Michailidou, Kyriaki; Milani, Lili; Milne, Roger L; Montgomery, Grant W; Mulligan, Anna M; Nalls, Mike A; Navarro, Pau; Nevanlinna, Heli; Nyholt, Dale R; Oldehinkel, Albertine J; O'Mara, Tracy A; Padmanabhan, Sandosh; Palotie, Aarno; Pedersen, Nancy; Peters, Annette; Peto, Julian; Pharoah, Paul D P; Pouta, Anneli; Radice, Paolo; Rahman, Iffat; Ring, Susan M; Robino, Antonietta; Rosendaal, Frits R; Rudan, Igor; Rueedi, Rico; Ruggiero, Daniela; Sala, Cinzia F; Schmidt, Marjanka K; Scott, Robert A; Shah, Mitul; Sorice, Rossella; Southey, Melissa C; Sovio, Ulla; Stampfer, Meir; Steri, Maristella; Strauch, Konstantin; Tanaka, Toshiko; Tikkanen, Emmi; Timpson, Nicholas J; Traglia, Michela; Truong, Thérèse; Tyrer, Jonathan P; Uitterlinden, André G; Edwards, Digna R Velez; Vitart, Veronique; Völker, Uwe; Vollenweider, Peter; Wang, Qin; Widen, Elisabeth; van Dijk, Ko Willems; Willemsen, Gonneke; Winqvist, Robert; Wolffenbuttel, Bruce H R; Zhao, Jing Hua; Zoledziewska, Magdalena; Zygmunt, Marek; Alizadeh, Behrooz Z; Boomsma, Dorret I; Ciullo, Marina; Cucca, Francesco; Esko, Tõnu; Franceschini, Nora; Gieger, Christian; Gudnason, Vilmundur; Hayward, Caroline; Kraft, Peter; Lawlor, Debbie A; Magnusson, Patrik K E; Martin, Nicholas G; Mook-Kanamori, Dennis O; Nohr, Ellen A; Polasek, Ozren; Porteous, David; Price, Alkes L; Ridker, Paul M; Snieder, Harold; Spector, Tim D; Stöckl, Doris; Toniolo, Daniela; Ulivi, Sheila; Visser, Jenny A; Völzke, Henry; Wareham, Nicholas J; Wilson, James F; Spurdle, Amanda B; Thorsteindottir, Unnur; Pollard, Katherine S; Easton, Douglas F; Tung, Joyce Y; Chang-Claude, Jenny; Hinds, David; Murray, Anna; Murabito, Joanne M; Stefansson, Kari; Ong, Ken K; Perry, John R B; LifeLines Cohort Study.
in: NAT GENET, Jahrgang 49, Nr. 6, 06.2017, S. 834-841.Publikationen: SCORING: Beitrag in Fachzeitschrift/Zeitung › SCORING: Zeitschriftenaufsatz › Forschung › Begutachtung
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TY - JOUR
T1 - Genomic analyses identify hundreds of variants associated with age at menarche and support a role for puberty timing in cancer risk
AU - Day, Felix R
AU - Thompson, Deborah J
AU - Helgason, Hannes
AU - Chasman, Daniel I
AU - Finucane, Hilary
AU - Sulem, Patrick
AU - Ruth, Katherine S
AU - Whalen, Sean
AU - Sarkar, Abhishek K
AU - Albrecht, Eva
AU - Altmaier, Elisabeth
AU - Amini, Marzyeh
AU - Barbieri, Caterina M
AU - Boutin, Thibaud
AU - Campbell, Archie
AU - Demerath, Ellen
AU - Giri, Ayush
AU - He, Chunyan
AU - Hottenga, Jouke J
AU - Karlsson, Robert
AU - Kolcic, Ivana
AU - Loh, Po-Ru
AU - Lunetta, Kathryn L
AU - Mangino, Massimo
AU - Marco, Brumat
AU - McMahon, George
AU - Medland, Sarah E
AU - Nolte, Ilja M
AU - Noordam, Raymond
AU - Nutile, Teresa
AU - Paternoster, Lavinia
AU - Perjakova, Natalia
AU - Porcu, Eleonora
AU - Rose, Lynda M
AU - Schraut, Katharina E
AU - Segrè, Ayellet V
AU - Smith, Albert V
AU - Stolk, Lisette
AU - Teumer, Alexander
AU - Andrulis, Irene L
AU - Bandinelli, Stefania
AU - Beckmann, Matthias W
AU - Benitez, Javier
AU - Bergmann, Sven
AU - Bochud, Murielle
AU - Boerwinkle, Eric
AU - Bojesen, Stig E
AU - Bolla, Manjeet K
AU - Brand, Judith S
AU - Brauch, Hiltrud
AU - Brenner, Hermann
AU - Broer, Linda
AU - Brüning, Thomas
AU - Buring, Julie E
AU - Campbell, Harry
AU - Catamo, Eulalia
AU - Chanock, Stephen
AU - Chenevix-Trench, Georgia
AU - Corre, Tanguy
AU - Couch, Fergus J
AU - Cousminer, Diana L
AU - Cox, Angela
AU - Crisponi, Laura
AU - Czene, Kamila
AU - Davey Smith, George
AU - de Geus, Eco J C N
AU - de Mutsert, Renée
AU - De Vivo, Immaculata
AU - Dennis, Joe
AU - Devilee, Peter
AU - Dos-Santos-Silva, Isabel
AU - Dunning, Alison M
AU - Eriksson, Johan G
AU - Fasching, Peter A
AU - Fernández-Rhodes, Lindsay
AU - Ferrucci, Luigi
AU - Flesch-Janys, Dieter
AU - Franke, Lude
AU - Gabrielson, Marike
AU - Gandin, Ilaria
AU - Giles, Graham G
AU - Grallert, Harald
AU - Gudbjartsson, Daniel F
AU - Guénel, Pascal
AU - Hall, Per
AU - Hallberg, Emily
AU - Hamann, Ute
AU - Harris, Tamara B
AU - Hartman, Catharina A
AU - Heiss, Gerardo
AU - Hooning, Maartje J
AU - Hopper, John L
AU - Hu, Frank
AU - Hunter, David J
AU - Ikram, M Arfan
AU - Im, Hae Kyung
AU - Järvelin, Marjo-Riitta
AU - Joshi, Peter K
AU - Karasik, David
AU - Kellis, Manolis
AU - Kutalik, Zoltan
AU - LaChance, Genevieve
AU - Lambrechts, Diether
AU - Langenberg, Claudia
AU - Launer, Lenore J
AU - Laven, Joop S E
AU - Lenarduzzi, Stefania
AU - Li, Jingmei
AU - Lind, Penelope A
AU - Lindstrom, Sara
AU - Liu, YongMei
AU - Luan, Jian'an
AU - Mägi, Reedik
AU - Mannermaa, Arto
AU - Mbarek, Hamdi
AU - McCarthy, Mark I
AU - Meisinger, Christa
AU - Meitinger, Thomas
AU - Menni, Cristina
AU - Metspalu, Andres
AU - Michailidou, Kyriaki
AU - Milani, Lili
AU - Milne, Roger L
AU - Montgomery, Grant W
AU - Mulligan, Anna M
AU - Nalls, Mike A
AU - Navarro, Pau
AU - Nevanlinna, Heli
AU - Nyholt, Dale R
AU - Oldehinkel, Albertine J
AU - O'Mara, Tracy A
AU - Padmanabhan, Sandosh
AU - Palotie, Aarno
AU - Pedersen, Nancy
AU - Peters, Annette
AU - Peto, Julian
AU - Pharoah, Paul D P
AU - Pouta, Anneli
AU - Radice, Paolo
AU - Rahman, Iffat
AU - Ring, Susan M
AU - Robino, Antonietta
AU - Rosendaal, Frits R
AU - Rudan, Igor
AU - Rueedi, Rico
AU - Ruggiero, Daniela
AU - Sala, Cinzia F
AU - Schmidt, Marjanka K
AU - Scott, Robert A
AU - Shah, Mitul
AU - Sorice, Rossella
AU - Southey, Melissa C
AU - Sovio, Ulla
AU - Stampfer, Meir
AU - Steri, Maristella
AU - Strauch, Konstantin
AU - Tanaka, Toshiko
AU - Tikkanen, Emmi
AU - Timpson, Nicholas J
AU - Traglia, Michela
AU - Truong, Thérèse
AU - Tyrer, Jonathan P
AU - Uitterlinden, André G
AU - Edwards, Digna R Velez
AU - Vitart, Veronique
AU - Völker, Uwe
AU - Vollenweider, Peter
AU - Wang, Qin
AU - Widen, Elisabeth
AU - van Dijk, Ko Willems
AU - Willemsen, Gonneke
AU - Winqvist, Robert
AU - Wolffenbuttel, Bruce H R
AU - Zhao, Jing Hua
AU - Zoledziewska, Magdalena
AU - Zygmunt, Marek
AU - Alizadeh, Behrooz Z
AU - Boomsma, Dorret I
AU - Ciullo, Marina
AU - Cucca, Francesco
AU - Esko, Tõnu
AU - Franceschini, Nora
AU - Gieger, Christian
AU - Gudnason, Vilmundur
AU - Hayward, Caroline
AU - Kraft, Peter
AU - Lawlor, Debbie A
AU - Magnusson, Patrik K E
AU - Martin, Nicholas G
AU - Mook-Kanamori, Dennis O
AU - Nohr, Ellen A
AU - Polasek, Ozren
AU - Porteous, David
AU - Price, Alkes L
AU - Ridker, Paul M
AU - Snieder, Harold
AU - Spector, Tim D
AU - Stöckl, Doris
AU - Toniolo, Daniela
AU - Ulivi, Sheila
AU - Visser, Jenny A
AU - Völzke, Henry
AU - Wareham, Nicholas J
AU - Wilson, James F
AU - Spurdle, Amanda B
AU - Thorsteindottir, Unnur
AU - Pollard, Katherine S
AU - Easton, Douglas F
AU - Tung, Joyce Y
AU - Chang-Claude, Jenny
AU - Hinds, David
AU - Murray, Anna
AU - Murabito, Joanne M
AU - Stefansson, Kari
AU - Ong, Ken K
AU - Perry, John R B
AU - LifeLines Cohort Study
PY - 2017/6
Y1 - 2017/6
N2 - The timing of puberty is a highly polygenic childhood trait that is epidemiologically associated with various adult diseases. Using 1000 Genomes Project-imputed genotype data in up to ∼370,000 women, we identify 389 independent signals (P < 5 × 10-8) for age at menarche, a milestone in female pubertal development. In Icelandic data, these signals explain ∼7.4% of the population variance in age at menarche, corresponding to ∼25% of the estimated heritability. We implicate ∼250 genes via coding variation or associated expression, demonstrating significant enrichment in neural tissues. Rare variants near the imprinted genes MKRN3 and DLK1 were identified, exhibiting large effects when paternally inherited. Mendelian randomization analyses suggest causal inverse associations, independent of body mass index (BMI), between puberty timing and risks for breast and endometrial cancers in women and prostate cancer in men. In aggregate, our findings highlight the complexity of the genetic regulation of puberty timing and support causal links with cancer susceptibility.
AB - The timing of puberty is a highly polygenic childhood trait that is epidemiologically associated with various adult diseases. Using 1000 Genomes Project-imputed genotype data in up to ∼370,000 women, we identify 389 independent signals (P < 5 × 10-8) for age at menarche, a milestone in female pubertal development. In Icelandic data, these signals explain ∼7.4% of the population variance in age at menarche, corresponding to ∼25% of the estimated heritability. We implicate ∼250 genes via coding variation or associated expression, demonstrating significant enrichment in neural tissues. Rare variants near the imprinted genes MKRN3 and DLK1 were identified, exhibiting large effects when paternally inherited. Mendelian randomization analyses suggest causal inverse associations, independent of body mass index (BMI), between puberty timing and risks for breast and endometrial cancers in women and prostate cancer in men. In aggregate, our findings highlight the complexity of the genetic regulation of puberty timing and support causal links with cancer susceptibility.
KW - Adolescent
KW - Age Factors
KW - Body Mass Index
KW - Databases, Genetic
KW - Female
KW - Genetic Predisposition to Disease
KW - Genome-Wide Association Study
KW - Genomic Imprinting
KW - Humans
KW - Intercellular Signaling Peptides and Proteins
KW - Male
KW - Membrane Proteins
KW - Menarche
KW - Neoplasms
KW - Polymorphism, Single Nucleotide
KW - Puberty
KW - Quantitative Trait Loci
KW - Ribonucleoproteins
KW - Risk Factors
KW - Journal Article
U2 - 10.1038/ng.3841
DO - 10.1038/ng.3841
M3 - SCORING: Journal article
C2 - 28436984
VL - 49
SP - 834
EP - 841
JO - NAT GENET
JF - NAT GENET
SN - 1061-4036
IS - 6
ER -