Genome-wide Trans-ethnic Meta-analysis Identifies Seven Genetic Loci Influencing Erythrocyte Traits and a Role for RBPMS in Erythropoiesis

  • Frank J A van Rooij
  • Rehan Qayyum
  • Albert V Smith
  • Yi Zhou
  • Stella Trompet
  • Toshiko Tanaka
  • Margaux F Keller
  • Li-Ching Chang
  • Helena Schmidt
  • Min-Lee Yang
  • Ming-Huei Chen
  • James Hayes
  • Andrew D Johnson
  • Lisa R Yanek
  • Christian Mueller
  • Leslie Lange
  • James S Floyd
  • Mohsen Ghanbari
  • Alan B Zonderman
  • J Wouter Jukema
  • Albert Hofman
  • Cornelia M van Duijn
  • Karl C Desch
  • Yasaman Saba
  • Ayse B Ozel
  • Beverly M Snively
  • Jer-Yuarn Wu
  • Reinhold Schmidt
  • Myriam Fornage
  • Robert J Klein
  • Caroline S Fox
  • Koichi Matsuda
  • Naoyuki Kamatani
  • Philipp S Wild
  • David J Stott
  • Ian Ford
  • P Eline Slagboom
  • Jaden Yang
  • Audrey Y Chu
  • Amy J Lambert
  • André G Uitterlinden
  • Oscar H Franco
  • Edith Hofer
  • David Ginsburg
  • Bella Hu
  • Brendan Keating
  • Ursula M Schick
  • Jennifer A Brody
  • Jun Z Li
  • Zhao Chen
  • Tanja Zeller
  • Jack M Guralnik
  • Daniel I Chasman
  • Luanne L Peters
  • Michiaki Kubo
  • Diane M Becker
  • Jin Li
  • Gudny Eiriksdottir
  • Jerome I Rotter
  • Daniel Levy
  • Vera Grossmann
  • Kushang V Patel
  • Chien-Hsiun Chen
  • Paul M Ridker
  • Hua Tang
  • Lenore J Launer
  • Kenneth M Rice
  • Ruifang Li-Gao
  • Luigi Ferrucci
  • Michelle K Evans
  • Avik Choudhuri
  • Eirini Trompouki
  • Brian J Abraham
  • Song Yang
  • Atsushi Takahashi
  • Yoichiro Kamatani
  • Charles Kooperberg
  • Tamara B Harris
  • Sun Ha Jee
  • Josef Coresh
  • Fuu-Jen Tsai
  • Dan L Longo
  • Yuan-Tsong Chen
  • Janine F Felix
  • Qiong Yang
  • Bruce M Psaty
  • Eric Boerwinkle
  • Lewis C Becker
  • Dennis O Mook-Kanamori
  • James G Wilson
  • Vilmundur Gudnason
  • Christopher J O'Donnell
  • Abbas Dehghan
  • L Adrienne Cupples
  • Michael A Nalls
  • Andrew P Morris
  • Yukinori Okada
  • Alexander P Reiner
  • Leonard I Zon
  • Santhi K Ganesh
  • BioBank Japan Project

Beteiligte Einrichtungen

Abstract

Genome-wide association studies (GWASs) have identified loci for erythrocyte traits in primarily European ancestry populations. We conducted GWAS meta-analyses of six erythrocyte traits in 71,638 individuals from European, East Asian, and African ancestries using a Bayesian approach to account for heterogeneity in allelic effects and variation in the structure of linkage disequilibrium between ethnicities. We identified seven loci for erythrocyte traits including a locus (RBPMS/GTF2E2) associated with mean corpuscular hemoglobin and mean corpuscular volume. Statistical fine-mapping at this locus pointed to RBPMS at this locus and excluded nearby GTF2E2. Using zebrafish morpholino to evaluate loss of function, we observed a strong in vivo erythropoietic effect for RBPMS but not for GTF2E2, supporting the statistical fine-mapping at this locus and demonstrating that RBPMS is a regulator of erythropoiesis. Our findings show the utility of trans-ethnic GWASs for discovery and characterization of genetic loci influencing hematologic traits.

Bibliografische Daten

OriginalspracheEnglisch
ISSN0002-9297
DOIs
StatusVeröffentlicht - 05.01.2017

Anmerkungen des Dekanats

Copyright © 2017 American Society of Human Genetics. All rights reserved.

PubMed 28017375