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Institute of Computational Neuroscience

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  1. SCORING: Journal article › Research › Peer-reviewed

  2. Shaping brain structure: Genetic and phylogenetic axes of macroscale organization of cortical thickness

    Valk, S. L., Xu, T., Margulies, D. S., Masouleh, S. K., Paquola, C., Goulas, A., Kochunov, P., Smallwood, J., Yeo, B. T. T., Bernhardt, B. C. & Eickhoff, S. B., 09.2020, In: SCI ADV. 6, 39

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  3. Should I stay or should I go--cognitive conflict in multi-attribute signals probed with East and West German 'Ampelmännchen' traffic signs

    Peschke, C., Olk, B. & Hilgetag, C-C., 01.01.2013, In: PLOS ONE. 8, 5, p. e64712

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  4. Simulation of hip operations and design of custom-made endoprostheses using virtual reality techniques.

    Handels, H., Ehrhardt, J., Plötz, W. & Pöppl, S. J., 2001, In: METHOD INFORM MED. 40, 2, p. 74-77 2.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  5. Simulation of neuroplasticity in a CNN-based in-silico model of neurodegeneration of the visual system

    Moore, J. A., Wilms, M., Gutierrez, A., Ismail, Z., Fakhar, K., Hadaeghi, F., Hilgetag, C. C. & Forkert, N. D., 2023, In: FRONT COMPUT NEUROSC. 17, p. 1274824

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  6. Simulation of range imaging-based estimation of respiratory lung motion. Influence of noise, signal dimensionality and sampling patterns

    Wilms, M., Werner, R., Blendowski, M., Ortmüller, J. & Handels, H., 2014, In: METHOD INFORM MED. 53, 4, p. 257-63 7 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  7. Simulation of spatiotemporal CT data sets using a 4D MRI-based lung motion model

    Marx, M., Ehrhardt, J., Werner, R., Schlemmer, H-P. & Handels, H., 2014, In: INT J COMPUT ASS RAD. 9, 3, p. 401-9 9 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  8. Simultaneity of responses in a hierarchical visual network

    Petroni, F., Panzeri, S., Hilgetag, C. C., Kötter, R. & Young, M. P., 28.08.2001, In: NEUROREPORT. 12, 12, p. 2753-9 7 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  9. Single Image-Based Vignetting Correction for Improving the Consistency of Neural Activity Analysis in 2-Photon Functional Microscopy

    Li, D., Wang, G., Werner, R., Xie, H., Guan, J-S. & Hilgetag, C-C., 2021, In: FRONT NEUROINFORM. 15, p. 674439 674439.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  10. Situating the default-mode network along a principal gradient of macroscale cortical organization

    Margulies, D. S., Ghosh, S. S., Goulas, A., Falkiewicz, M., Huntenburg, J. M., Langs, G., Bezgin, G., Eickhoff, S. B., Castellanos, F. X., Petrides, M., Jefferies, E. & Smallwood, J., 01.11.2016, In: P NATL ACAD SCI USA. 113, 44, p. 12574-12579 6 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  11. Skin Lesion Classification Using CNNs with Patch-Based Attention and Diagnosis-Guided Loss Weighting

    Gessert, N., Sentker, T., Madesta, F., Schmitz, R., Kniep, H., Baltruschat, I., Werner, R. & Schlaefer, A., 02.2020, In: IEEE T BIO-MED ENG. 67, 2, p. 495-503 9 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  12. Skin lesion classification using ensembles of multi-resolution EfficientNets with meta data

    Gessert, N., Nielsen, M., Shaikh, M., Werner, R. & Schlaefer, A., 2020, In: METHODSX. 7, 7, p. 100864 8 p., 100864.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  13. Spatial distribution of perfusion abnormality in acute MCA occlusion is associated with likelihood of later recanalization

    Siemonsen, S., Forkert, N. D., Hansen, A. T., Kemmling, A., Thomalla, G. & Fiehler, J., 2014, In: J CEREBR BLOOD F MET. 34, 5, p. 813-819 7 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  14. Spatial growth of real-world networks

    Kaiser, M. & Hilgetag, C. C., 03.2004, In: PHYS REV E. 69, 3 Pt 2, p. 036103

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  15. Spatial normalization for voxel-based lesion symptom mapping: impact of registration approaches

    Jühling, D., Rajashekar, D., Cheng, B., Hilgetag, C. C., Forkert, N. D. & Werner, R., 17.01.2024, In: FRONT NEUROSCI-SWITZ. 18, p. 1296357

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  16. Spatio-temporal feature learning with reservoir computing for T-cell segmentation in live-cell Ca2+ fluorescence microscopy

    Hadaeghi, F., Diercks, B-P., Schetelig, D., Damicelli, F., Wolf, I. M. A. & Werner, R., 15.04.2021, In: SCI REP-UK. 11, 1, 8233.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  17. Spatiotemporal ontogeny of brain wiring

    Goulas, A., Betzel, R. F. & Hilgetag, C. C., 06.2019, In: SCI ADV. 5, 6, p. eaav9694

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  18. Specific and Evolving Resting-State Network Alterations in Post-Concussion Syndrome Following Mild Traumatic Brain Injury

    Messé, A., Caplain, S., Pélégrini-Issac, M., Blancho, S., Lévy, R., Aghakhani, N., Montreuil, M., Benali, H. & Lehéricy, S., 06.06.2013, In: PLOS ONE. 8, 6, e65470.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  19. Stochastic resonance in discrete excitable dynamics on graphs

    Hütt, M-T., Jain, M. K., Hilgetag, C. & Lesne, A., 2012, In: CHAOS SOLITON FRACT. 45, 5, p. 611-618 5.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  20. Structural basis of envelope and phase intrinsic coupling modes in the cerebral cortex

    Messé, A., Hollensteiner, K. J., Delettre, C., Dell-Brown, L-A., Pieper, F., Nentwig, L. J., Galindo-Leon, E. E., Larrat, B., Mériaux, S., Mangin, J-F., Reillo, I., Juan Romero, C. D., Borrell, V., Engler, G., Toro, R., Engel, A. K. & Hilgetag, C. C., 01.08.2023, In: NEUROIMAGE. 276, 120212.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  21. Structural integrity of white matter tracts as a predictor of acute ischemic stroke outcome

    Rajashekar, D., Mouchès, P., Fiehler, J., Menon, B. K., Goyal, M., Demchuk, A. M., Hill, M. D., Dukelow, S. P. & Forkert, N. D., 12.2020, In: INT J STROKE. 15, 9, p. 965-972 8 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  22. Structural Properties of Synaptic Transmission and Temporal Dynamics at Excitatory Layer 5B Synapses in the Adult Rat Somatosensory Cortex

    Rollenhagen, A., Ohana, O., Sätzler, K., Hilgetag, C. C., Kuhl, D. & Lübke, J. H. R., 2018, In: FRONT SYNAPTIC NEURO. 10, p. 24

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  23. Structure-function relationship in complex brain networks expressed by hierarchical synchronization

    Zhou, C., Zemanova, L., Zamora-Lopez, G., Hilgetag, C. C. & Kurths, J., 2007, In: NEW J PHYS. 9

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  24. Structure-preserving interpolation of temporal and spatial image sequences using an optical flow-based method.

    Ehrhardt, J., Säring, D. & Handels, H., 2007, In: METHOD INFORM MED. 46, 3, p. 300-307 3.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  25. Submillimeter-Accurate Marker Localization within Low Gradient Magnetic Particle Imaging Tomograms

    Griese, F., Knopp, T., Werner, R., Schlaefer, A. & Möddel, M., 23.03.2017, In: Int J Magn Part Imag. 3, 1, p. article ID 1703011 9 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  26. Subpopulation-based correspondence modelling for improved respiratory motion estimation in the presence of inter-fraction motion variations

    Wilms, M., Werner, R., Yamamoto, T., Handels, H. & Ehrhardt, J., 26.06.2017, In: PHYS MED BIOL. 62, 14, p. 5823-5839 17 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  27. Sustained activity in hierarchical modular neural networks: self-organized criticality and oscillations.

    Wang, S-J., Hilgetag, C. & Zhou, C., 2011, In: FRONT COMPUT NEUROSC. 5, p. 30

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  28. Systematic modelling of the development of laminar projection origins in the cerebral cortex: Interactions of spatio-temporal patterns of neurogenesis and cellular heterogeneity

    Beul, S. F. & Hilgetag, C. C., 10.2020, In: PLOS COMPUT BIOL. 16, 10, p. e1007991

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  29. Systematic perturbation of an artificial neural network: A step towards quantifying causal contributions in the brain

    Fakhar, K. & Hilgetag, C. C., 06.2022, In: PLOS COMPUT BIOL. 18, 6, e1010250.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  30. Task-specific subnetworks extend from prefrontal cortex to striatum

    Stiers, P. & Goulas, A., 11.2022, In: CORTEX. 156, p. 106-125 20 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  31. Technical considerations of a game-theoretical approach for lesion symptom mapping

    Zavaglia, M., Forkert, N. D., Cheng, B., Gerloff, C., Thomalla, G. & Hilgetag, C. C., 27.06.2016, In: BMC NEUROSCI. 17, 1, p. 40

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  32. Technical Note: Development of a tidal volume surrogate that replaces spirometry for physiological breathing monitoring in 4D CT

    Werner, R., White, B., Handels, H., Lu, W. & Low, D. A., 2010, In: MED PHYS. 36, 2, p. 615-620 2.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  33. Territorial and microvascular perfusion impairment in brain arteriovenous malformations.

    Fiehler, J., Illies, T., Piening, M., Säring, D., Forkert, N., Regelsberger, J., Grzyska, U., Handels, H. & Byrne, J. V., 2009, In: AM J NEURORADIOL. 30, 2, p. 356-361 2.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  34. The architecture of mammalian cortical connectomes in light of the theory of the dual origin of the cerebral cortex

    Goulas, A., Margulies, D. S., Bezgin, G. & Hilgetag, C. C., 09.2019, In: CORTEX. 118, p. 244-261 18 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  35. The challenge of mapping the human connectome based on diffusion tractography

    Maier-Hein, K. H., Neher, P. F., Houde, J-C., Côté, M-A., Garyfallidis, E., Zhong, J., Chamberland, M., Yeh, F-C., Lin, Y-C., Ji, Q., Reddick, W. E., Glass, J. O., Chen, D. Q., Feng, Y., Gao, C., Wu, Y., Ma, J., Renjie, H., Li, Q., Westin, C-F., Deslauriers-Gauthier, S., González, J. O. O., Paquette, M., St-Jean, S., Girard, G., Rheault, F., Sidhu, J., Tax, C. M. W., Guo, F., Mesri, H. Y., Dávid, S., Froeling, M., Heemskerk, A. M., Leemans, A., Boré, A., Pinsard, B., Bedetti, C., Desrosiers, M., Brambati, S., Doyon, J., Sarica, A., Vasta, R., Cerasa, A., Quattrone, A., Yeatman, J., Khan, A. R., Hodges, W., Alexander, S., Romascano, D., Barakovic, M., Auría, A., Esteban, O., Lemkaddem, A., Thiran, J-P., Cetingul, H. E., Odry, B. L., Mailhe, B., Nadar, M. S., Pizzagalli, F., Prasad, G., Villalon-Reina, J. E., Galvis, J., Thompson, P. M., Requejo, F. D. S., Laguna, P. L., Lacerda, L. M., Barrett, R., Dell'Acqua, F., Catani, M., Petit, L., Caruyer, E., Daducci, A., Dyrby, T. B., Holland-Letz, T., Hilgetag, C. C., Stieltjes, B. & Descoteaux, M., 07.11.2017, In: NAT COMMUN. 8, 1, p. 1349

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  36. The connectional organization of the cortico-thalamic system of the cat

    Scannell, J. W., Burns, G. A., Hilgetag, C. C., O'Neil, M. A. & Young, M. P., 04.06.1999, In: CEREB CORTEX. 9, 3, p. 277-99 23 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  37. The contribution of stimulus-driven and goal-driven mechanisms to feature-based selection in patients with spatial attention deficits.

    Dombrowe, I., Donk, M., Wright, H., Olivers, C. N. L. & Humphreys, G. W., 2012, In: COGN NEUROPSYCHOL. 29, 3, p. 249-274 3.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  38. The costs of switching attentional sets.

    Dombrowe, I., Donk, M. & Olivers, C. N. L., 2011, In: ATTEN PERCEPT PSYCHO. 73, 8, p. 2481-2488 8.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  39. The effect of 10 Hz repetitive transcranial magnetic stimulation of posterior parietal cortex on visual attention

    Dombrowe, I., Juravle, G., Alavash, M., Gießing, C. & Hilgetag, C. C., 13.05.2015, In: PLOS ONE. 10, 5, p. Art. UNSP e0126802

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  40. The effect of connectivity on EEG rhythms, power spectral density and coherence among coupled neural populations: analysis with a neural mass model.

    Zavaglia, M., Astolfi, L., Babiloni, F. & Ursino, M., 2008, In: IEEE T BIO-MED ENG. 55, 1, p. 69-77 1.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  41. The extent of perfusion deficit does not relate to the visibility of acute ischemic lesions on fluid-attenuated inversion recovery imaging.

    Cheng, B., Rosenkranz, M., Krützelmann, A. C., Fiehler, J., Forkert, N. D., Gerloff, C. & Thomalla, G., 2013, In: J NEUROIMAGING. 23, 2, p. 215-218 2.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  42. The generation of rhythms within a cortical region: analysis of a neural mass model.

    Ursino, M., Cona, F. & Zavaglia, M., 2010, In: NEUROIMAGE. 52, 3, p. 1080-1094 3.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  43. The Impact of Covariates in Voxel-Wise Lesion-Symptom Mapping

    Rajashekar, D., Wilms, M., Hecker, K. G., Hill, M. D., Dukelow, S., Fiehler, J. & Forkert, N. D., 2020, In: FRONT NEUROL. 11, p. 854

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  44. The natural axis of transmitter receptor distribution in the human cerebral cortex

    Goulas, A., Changeux, J-P., Wagstyl, K., Amunts, K., Palomero-Gallagher, N. & Hilgetag, C. C., 19.01.2021, In: P NATL ACAD SCI USA. 118, 3, e2020574118.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  45. The portable UNIX programming system (PUPS) and CANTOR: a computational environment for dynamical representation and analysis of complex neurobiological data

    O'Neill, M. A. & Hilgetag, C. C., 29.08.2001, In: PHILOS T R SOC B. 356, 1412, p. 1259-76 18 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  46. The primate connectome in context: Principles of connections of the cortical visual system

    Hilgetag, C. C., Medalla, M., Beul, S. F. & Barbas, H., 01.07.2016, In: NEUROIMAGE. 134, p. 685-702 18 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  47. The strength of weak connections in the macaque cortico-cortical network

    Goulas, A., Schaefer, A. & Margulies, D. S., 09.2015, In: BRAIN STRUCT FUNCT. 220, 5, p. 2939-51 13 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  48. The use of the Fourier transform in cardiac digital angiography.

    Witte, G., Hoehne, K. H., Riemer, M., Obermoeller, U. & Buecheler, E., 1987, In: CARDIOVASC INTER RAD. 10, 2, p. 59-64 2.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  49. Three-dimensional planning and simulation of hip operations and computer-assisted construction of endoprostheses in bone tumor surgery.

    Handels, H., Ehrhardt, J., Plötz, W. & Pöppl, S. J., 2001, In: COMPUT AIDED SURG. 6, 2, p. 65-76 2.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  50. Three-dimensional surface models of detailed lumbosacral structures reconstructed from the Visible Korean.

    Shin, D. S., Chung, M. S., Park, J. S., Park, H. S., Lee, S-B., Lee, S-H., Choi, H-N., Riemer, M., Handels, H., Lee, J. E. & Jung, W., 2011, In: ANN ANAT. 193, 1, p. 64-70 1.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  51. Time-Dependent Image Restoration of Low-SNR Live-Cell Ca2+ Fluorescence Microscopy Data

    Woelk, L-M., Kannabiran, S. A., Brock, V. J., Gee, C. E., Lohr, C., Guse, A. H., Diercks, B-P. & Werner, R., 30.10.2021, In: INT J MOL SCI. 22, 17 p., 11792.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

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