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Institute of Computational Neuroscience

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  1. SCORING: Contribution to collected editions/anthologies › Research › Peer-reviewed

  2. Toward employing the full potential of magnetic particle imaging: exploring visualization techniques and clinical use cases for real-time 3D vascular imaging

    Werner, R., Weller, D., Salamon, J. M., Möddel, M. & Knopp, T., 15.03.2019, Medical Imaging 2019: Biomedical Applications in Molecular, Structural, and Functional Imaging. 1 ed. SPIE , Vol. 10953. p. 109531V 6 p.

    Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review

  3. TV-L1-based 3D Medical Image Registration with the Census Cost Function

    Hermann, S. & Werner, R., 2014, Image and Video Technology. Klette, R., Rivera, M. & Satoh, S. (eds.). 1 ed. Berlin, Heidelberg: Springer, Vol. 8333. p. 149-161 13 p. (Lecture Notes in Computer Science).

    Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review

  4. Use of convex analysis for the modelling of biochemical reaction systems

    Schuster, S., Hilgetag, C-C., Schuster, R. & Höfer, T., 1994, System Modelling an Optimization - Lecture Notes in Control and Information Sciences. Springer, p. 365-374

    Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review

  5. Validation and comparison of a biophysical modeling approach and non-linear registration for estimation of lung motion fields in thoracic 4D CT data (Proceedings Paper)

    Werner, R., Ehrhardt, J., Schmidt-Richberg, A. & Handels, H., 2009, Medical Imaging 2009: Image Processing (Proceedings Volume). SPIE, p. 1-8 8 p.

    Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review

  6. Validation and Comparison of Approaches to Respiratory Motion Estimation

    Kabus, S., Klinder, T., Murphy, K., Werner, R. & Sarrut, D., 2013, 4D Modeling and Estimation of Respiratory Motion for Radiation Therapy. Ehrhardt, J. & Lorenz, C. (eds.). 1 ed. Springer, p. 159-183 25 p. (Biological and Medical Physics, Biomedical Engineering).

    Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review

  7. Variational Registration: A Flexible Open-Source ITK Toolbox for Nonrigid Image Registration

    Ehrhardt, J., Schmidt-Richberg, A., Werner, R. & Handels, H., 2015, Bildverarbeitung für die Medizin 2015. Handels, H., Deserno, T. M., Meinzer, H-P. & Tolxdorff, T. (eds.). 1 ed. Berlin Heidelberg: Springer, p. 209-214 6 p. (Informatik Aktuell).

    Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review

  8. Vergleich verschiedener Werkzeuge zur Erzeugung und Nutzung von medizinischen Virtuellen Patienten

    Riemer, M., Wollatz, M., Kludas, L., Mendorf, A., Nguyen, T-A. & Seibel, J., 2010, e-Health 2011 Informationstechnologien und Telematik im Gesundheitswesen. medical future verlag, p. 289-295 7 p.

    Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review

  9. Vesselness-geführte Level-Set Segmentierung von zerebralen Gefäßen

    Forkert, N., Schmidt-Richberg, A., Ehrhardt, J., Fiehler, J., Handels, H. & Säring, D., 2011, Bildverarbeitung für die Medizin 2011. Springer Berlin Heidelberg, p. 8-12 5 p.

    Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review

  10. Virtual Spirometry: Utilizing an Abdominal Bellows System for Quantitatively Gating in 4D CT Acquisition

    Werner, R., White, B., Schwenke, M., Handels, H., Lu, W. & Low, D. A., 2009, World Congress on Medical Physics and Biomedical Engineering September 7 - 12, 2009 Munich, Germany (Ifmbe Proceedings). Springer-Verlag GmbH, p. 855-858 4 p.

    Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review

  11. VR-Trainingssimulator für Lumbal- und Aszitespunktionen mit elastischer Nadelverbiegung

    Dahmke, T., Färber, M., Bohn, CA. & Handels, H., 2009, Bildverarbeitung für die Medizin 2009. Springer Berlin Heidelberg, p. 87-91 5 p.

    Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review

  12. Who does what: Taking measures

    Keinan, A., Kaufman, A., Hilgetag, C-C., Meilijson, I. & Ruppin, E., 2007, Statistical and process models of cognitive aging. CRC Press, p. 163-200 37 p.

    Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review

  13. Widening the Focus: Biomedical Image Segmentation Challenges and the Underestimated Role of Patch Sampling and Inference Strategies

    Madesta, F., Schmitz, R., Rösch, T. & Werner, R., 10.2020, MICCAI 2020. 1 ed. Springer Nature Switzerland, Vol. 12264. p. 289-298 10 p. (Lecture Notes in Computer Science (LNCS)).

    Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review

  14. Wiring Principles, Optimization

    Kaiser, M. & Hilgetag, C-C., 2015, Encyclopedia of Computational Neuroscience. Jaeger, D. & Ranu, J. (eds.). 1 ed. New York: Springer, p. 3172-3177 7 p.

    Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review

  15. Wrestling the Devil of Wasting Time: MPI System Matrix Recovery by Deep Learning

    Baltruschat, I. M., Griese, F., Szwargulski, P. K., Werner, R. & Knopp, T., 2019, 9th International Workschop on Magnetic Particle Imaging (IWMPI 2018) . 1 ed. Infinite Science Publishing

    Research output: SCORING: Contribution to book/anthology › SCORING: Contribution to collected editions/anthologies › Research › peer-review

  16. SCORING: Journal article › Research › Not peer-reviewed

  17. A Flexible Variational Registration Framework

    Schmidt-Richberg, A., Werner, R., Handels, H. & Ehrhardt, J., 09.05.2014, In: Insight Journal. 12 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research

  18. Brain network science needs to become predictive. Comment on "Understanding brain networks and brain organization" by Luiz Pessoa

    Hilgetag, C. C. & von Luxburg, U., 01.09.2014, In: PHYS LIFE REV. 11, 3, p. 446-7 2 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research

  19. Connectivity and cortical architecture

    Hilgetag, C. C. & Amunts, K., 2016, In: e-Neuroforum. 7, 3, p. 56-63 8 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research

  20. Sculpting the brain

    Hilgetag, C. C. & Barbas, H., 02.2009, In: SCI AM. 300, 2, p. 66-71 6 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research

  21. SCORING: Journal article › Research › Peer-reviewed

  22. 3D cerebrovascular segmentation combining fuzzy vessel enhancement and level-sets with anisotropic energy weights

    Forkert, N. D., Schmidt-Richberg, A., Fiehler, J., Illies, T., Möller, D., Säring, D., Handels, H. & Ehrhardt, J., 01.02.2013, In: MAGN RESON IMAGING. 31, 2, p. 262-71 10 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  23. [3-dimensional display of computed tomographic studies of craniofacial anomalies]

    Witte, G., Höltje, W., Tiede, U. & Riemer, M., 1986, In: ROFO-FORTSCHR RONTG. 144, 4, p. 400-405 4.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  24. 3-D segmentation of MR images of the head for 3-D display.

    Bomans, M., Hohne, K. H., Tiede, U. & Riemer, M., 1990, In: IEEE T MED IMAGING. 9, 2, p. 177-183 2.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  25. 3D Segmentation of the Left Ventricle Combining Long- and Short-axis MR Images.

    Säring, D., Relan, J., Groth, M., Müllerleile, K. & Handels, H., 2009, In: METHOD INFORM MED. 48, 4, 4.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  26. [3-D visualization of dose distributions in CT image volumes]

    Tabbert, E., Riemer, M., Schiemann, T., Tiede, U. & Höhne, K. H., 1992, In: STRAHLENTHER ONKOL. 168, 1, p. 31-34 1.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  27. 4D blood flow visualization fusing 3D and 4D MRA image sequences.

    Forkert, N., Fiehler, J., Illies, T., Möller, D. P. F., Handels, H. & Säring, D., 2012, In: J MAGN RESON IMAGING. 36, 2, p. 443-453 2.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  28. 4D CT image artifacts affect local control in SBRT of lung and liver metastases

    Sentker, T., Schmidt, V., Ozga, A-K., Petersen, C., Madesta, F., Hofmann, C., Werner, R. & Gauer, T., 07.2020, In: RADIOTHER ONCOL. 148, p. 229-234 6 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  29. 4D dose simulation in volumetric arc therapy: Accuracy and affecting parameters

    Sothmann, T., Gauer, T. & Werner, R., 2017, In: PLOS ONE. 12, 2, p. e0172810 17 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  30. 4D medical image computing and visualization of lung tumor mobility in spatio-temporal CT image data.

    Handels, H., Werner, R., Schmidt, R., Frenzel, T., Lu, W., Low, D. & Ehrhardt, J., 2007, In: INT J MED INFORM. 76, 3, p. 433-439 3.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  31. A Bayesian Alternative to Mutual Information for the Hierarchical Clustering of Dependent Random Variables

    Marrelec, G., Messé, A. & Bellec, P., 2015, In: PLOS ONE. 10, 9, p. e0137278

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  32. A blueprint of mammalian cortical connectomes

    Goulas, A., Majka, P., Rosa, M. G. P. & Hilgetag, C. C., 03.2019, In: PLOS BIOL. 17, 3, p. e2005346

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  33. A closer look at the apparent correlation of structural and functional connectivity in excitable neural networks

    Messé, A., Hütt, M-T., König, P. & Hilgetag, C. C., 19.01.2015, In: SCI REP-UK. 5, p. Art. 7870

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  34. A computerized three-dimensional atlas of the human skull and brain.

    Tiede, U., Bomans, M., Höhne, K. H., Pommert, A., Riemer, M., Schiemann, T., Schubert, R. & Lierse, W., 1993, In: AM J NEURORADIOL. 14, 3, p. 551-551 3.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  35. A Connectomic Hypothesis for the Hominization of the Brain

    Changeux, J-P., Goulas, A. & Hilgetag, C. C., 31.03.2021, In: CEREB CORTEX. 31, 5, p. 2425-2449 25 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  36. Adhesion to laminin-1 and collagen IV induces the formation of Ca2+ microdomains that sensitize mouse T cells for activation

    Weiß, M., Hernandez, L. C., Gil Montoya, D. C., Löhndorf, A., Krüger, A., Kopdag, M., Uebler, L., Landwehr, M., Nawrocki, M., Huber, S., Woelk, L-M., Werner, R., Failla, A. V., Flügel, A., Dupont, G., Guse, A. H. & Diercks, B-P., 20.06.2023, In: SCIENCE SIGNALING. 16, 790, p. eabn9405

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  37. Advances in medical image computing.

    Handels, H., Horsch, A. & Meinzer, H-P., 2007, In: METHOD INFORM MED. 46, 3, p. 251-253 3.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  38. Advances in medical image computing.

    Tolxdorff, T., Deserno, T. M., Handels, H. & Meinzer, H-P., 2009, In: METHOD INFORM MED. 48, 4, p. 311-313 4.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  39. A dynamical pattern recognition model of gamma activity in auditory cortex.

    Zavaglia, M., Canolty, R. T., Schofield, T. M., Leff, A. P., Ursino, M., Knight, R. T. & Penny, W. D., 2012, In: NEURAL NETWORKS. 28, p. 1-14

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  40. A framework for representation and visualization of 3D shape variability of organs in an interactive anatomical atlas.

    Handels, H. & Hacker, S., 2009, In: METHOD INFORM MED. 48, 3, p. 272-281 3.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  41. Aligning 3D time-of-flight MRA datasets for quantitative longitudinal studies: evaluation of rigid registration techniques

    Verleger, T., Schönfeld, M., Säring, D., Siemonsen, S., Fiehler, J. & Forkert, N. D., 2014, In: MAGN RESON IMAGING. 32, 10, p. 1390-5 6 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  42. Altered topology of large-scale structural brain networks in chronic stroke

    Cheng, B., Schlemm, E., Schulz, R., Bönstrup, M., Messe, A., Hilgetag, C-C., Gerloff, C. & Thomalla, G., 04.10.2019, In: BRAIN COMMUN. 2019, 1, p. 1-13

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  43. Altered topology of structural brain networks in patients with Gilles de la Tourette syndrome

    Schlemm, E., Cheng, B., Fischer, F., Hilgetag, C., Gerloff, C. & Thomalla, G., 06.09.2017, In: SCI REP-UK. 7, 1, p. 10606

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  44. Analysis of the influence of 4D MR angiography temporal resolution on time-to-peak estimation error for different cerebral vessel structures.

    Forkert, N., Illies, T., Möller, D., Handels, H., Säring, D. & Fiehler, J., 2012, In: AM J NEURORADIOL. 33, 11, p. 2103-2109 11.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  45. Analysis of the influence of imaging-related uncertainties on cerebral aneurysm deformation quantification using a no-deformation physical flow phantom

    Schetelig, D., Sedlacik, J., Fiehler, J., Frölich, A., Knopp, T., Sothmann, T., Waschkewitz, J. & Werner, R., 20.07.2018, In: SCI REP-UK. 8, 1, p. 11004 9 p., 11004.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  46. An anatomical atlas to support the virtual planning of hip operations.

    Ehrhardt, J., Handels, H., Wegner, T., Strathmann, B., Plötz, W. & Pöppl, S. J., 2000, In: Stud Health Technol Inform. 77, p. 1226-1230

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  47. An architectonic type principle integrates macroscopic cortico-cortical connections with intrinsic cortical circuits of the primate brain

    Hilgetag, C. C., Beul, S. F., van Albada, S. J. & Goulas, A., 2019, In: NETW NEUROSCI. 3, 4, p. 905-923 19 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  48. An architectonic type principle in the development of laminar patterns of cortico-cortical connections

    Beul, S. F., Goulas, A. & Hilgetag, C. C., 05.2021, In: BRAIN STRUCT FUNCT. 226, 4, p. 979-987 9 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  49. Anatomical connectivity defines the organization of clusters of cortical areas in the macaque monkey and the cat

    Hilgetag, C. C., Burns, G. A., O'Neill, M. A., Scannell, J. W. & Young, M. P., 29.01.2000, In: PHILOS T R SOC B. 355, 1393, p. 91-110 20 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  50. A natural cortical axis connecting the outside and inside of the human brain

    Hilgetag, C-C., Goulas, A. & Changeux, J-P., 02.08.2022, In: NETW NEUROSCI. 6, 4, p. 950–959 10 p.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  51. A neural mass model for the simulation of cortical activity estimated from high resolution EEG during cognitive or motor tasks.

    Zavaglia, M., Astolfi, L., Babiloni, F. & Ursino, M., 2006, In: J NEUROSCI METH. 157, 2, p. 317-329 2.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  52. A neural mass model of interconnected regions simulates rhythm propagation observed via TMS-EEG.

    Cona, F., Zavaglia, M., Massimini, M., Rosanova, M. & Ursino, M., 2011, In: NEUROIMAGE. 57, 3, p. 1045-1058 3.

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

  53. A neural network model of multisensory representation of peripersonal space: effect of tool use.

    Ursino, M., Zavaglia, M., Magosso, E., Serino, A. & Giuseppe, D. P., 2007, In: Conf Proc IEEE Eng Med Biol Soc. 2007, p. 2735-2739

    Research output: SCORING: Contribution to journal › SCORING: Journal article › Research › peer-review

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